RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 VSTM2BA6NLU5 285 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 SRRM3A6NNA2 597 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-205ENST00000526954 C9J4A7 227 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 TERTO14746 1132 aaKnown RBP15.6■□□□□ 0.09
CAPN1-205ENST00000526954 DIAPH2O60879 1101 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 GUCY1B2O75343 617 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 GBAP04062 536 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 ANXA4P09525 319 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-205ENST00000526954 RNH1P13489 461 aaKnown RBP15.6■□□□□ 0.09
CAPN1-205ENST00000526954 MAPK1P28482 360 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 EPHA3P29320 983 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 MAPK12P53778 367 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 SEC24CP53992 1094 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 HNRNPH2P55795 449 aaKnown RBP15.6■□□□□ 0.09
CAPN1-205ENST00000526954 RAB38P57729 211 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 ERVK-8P63133 956 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 SYT16Q17RD7 645 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 MTERF4Q7Z6M4 381 aaKnown RBP15.6■□□□□ 0.09
CAPN1-205ENST00000526954 GPR180Q86V85 440 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 PARP9Q8IXQ6 854 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 FNDC5Q8NAU1 212 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 CEP70Q8NHQ1 597 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 RFWD2Q8NHY2 731 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 FGF11Q92914 225 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 MAPKAP1Q9BPZ7 522 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 CCDC28BQ9BUN5 200 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 TMEM121BQ9BXQ6 578 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-205ENST00000526954 WDR54Q9H977 334 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 GPN3Q9UHW5 284 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-205ENST00000526954 DLGAP4Q9Y2H0 992 aa15.6■□□□□ 0.09
CAPN1-205ENST00000526954 POLR3HQ9Y535 204 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-205ENST00000526954 GOLGA8QA0A0J9YX86 632 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 GNG14A0A1W2PPG7 69 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 BLACEA4D250 179 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 GOLGA8OA6NCC3 632 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 C21orf140B9A014 251 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 GOLGA8NF8WBI6 632 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 CYR61O00622 381 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 PROM1O43490 865 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 SHOX2O60902 331 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-205ENST00000526954 BMP10O95393 424 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 CAPNS1P04632 268 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 TCN2P20062 427 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 XCR1P46094 333 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 PCBP4P57723 403 aaKnown RBP15.59■□□□□ 0.09
CAPN1-205ENST00000526954 OCA2Q04671 838 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 ZNF763Q0D2J5 394 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 NCF4Q15080 339 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 NKG7Q16617 165 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 ACAD11Q709F0 780 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 SPATA19Q7Z5L4 167 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 ZC3H7AQ8IWR0 971 aaKnown RBP15.59■□□□□ 0.09
CAPN1-205ENST00000526954 SNIP1Q8TAD8 396 aaKnown RBP15.59■□□□□ 0.09
CAPN1-205ENST00000526954 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.59■□□□□ 0.09
CAPN1-205ENST00000526954 STT3BQ8TCJ2 826 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 C16orf78Q8WTQ4 265 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 CT55Q8WUE5 264 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 TBC1D20Q96BZ9 403 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 TM4SF18Q96CE8 201 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 PEX11GQ96HA9 241 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 OR52B2Q96RD2 323 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 EBF4Q9BQW3 602 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 GPR87Q9BY21 358 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 C14orf105Q9NVL8 296 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 NOP53Q9NZM5 478 aaKnown RBP15.59■□□□□ 0.09
CAPN1-205ENST00000526954 KLHL14Q9P2G3 628 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 CTSFQ9UBX1 484 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 NXT1Q9UKK6 140 aaKnown RBP15.59■□□□□ 0.09
CAPN1-205ENST00000526954 EIF3LQ9Y262 564 aaKnown RBP15.59■□□□□ 0.09
CAPN1-205ENST00000526954 ATG4BQ9Y4P1 393 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 SPACA6W5XKT8 324 aa15.59■□□□□ 0.09
CAPN1-205ENST00000526954 A0A1W2PR48 441 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 PSMD12O00232 456 aaPredicted RBP15.58■□□□□ 0.08
CAPN1-205ENST00000526954 CNOT3O75175 753 aaKnown RBP15.58■□□□□ 0.08
CAPN1-205ENST00000526954 FHP07954 510 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 ZGLP1P0C6A0 271 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 PRPS2P11908 318 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 BCKDHAP12694 445 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 PCSK2P16519 638 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 SDC1P18827 310 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 DRD4P21917 467 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 CPN2P22792 545 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 TLX1P31314 330 aaPredicted RBP15.58■□□□□ 0.08
CAPN1-205ENST00000526954 LSM12Q3MHD2 195 aaKnown RBP15.58■□□□□ 0.08
CAPN1-205ENST00000526954 VWA2Q5GFL6 755 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 IL23RQ5VWK5 629 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 MLIPQ5VWP3 458 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 SHISA5Q8N114 240 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 THOC1Q96FV9 657 aaKnown RBP15.58■□□□□ 0.08
CAPN1-205ENST00000526954 YIPF2Q9BWQ6 316 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 EBPLQ9BY08 206 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 NSRP1Q9H0G5 558 aaKnown RBP15.58■□□□□ 0.08
CAPN1-205ENST00000526954 CCDC86Q9H6F5 360 aaKnown RBP15.58■□□□□ 0.08
CAPN1-205ENST00000526954 MYNNQ9NPC7 610 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 TCF7L2Q9NQB0 619 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 PRDM9Q9NQV7 894 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 LANCL2Q9NS86 450 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 DCTN4Q9UJW0 460 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 CROTQ9UKG9 612 aa15.58■□□□□ 0.08
CAPN1-205ENST00000526954 FBXW2Q9UKT8 454 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms