RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 MFAP5Q13361 173 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 TBCCQ15814 346 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 ISLR2Q6UXK2 745 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 L3MBTL4Q8NA19 623 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 MFSD9Q8NBP5 474 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 OR1N1Q8NGS0 311 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 DNAJB8Q8NHS0 232 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 CREB3L4Q8TEY5 395 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 MAGEB10Q96LZ2 347 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-204ENST00000526430 CDK15Q96Q40 435 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 ZFYVE21Q9BQ24 234 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 MACROD1Q9BQ69 325 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 SLC7A5P2Q9GIP4 190 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 C20orf27Q9GZN8 174 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 LHPPQ9H008 270 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 EHD1Q9H4M9 534 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 NT5DC2Q9H857 520 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 NOL11Q9H8H0 719 aaKnown RBP10.3□□□□□ -0.76
NEDD8-204ENST00000526430 IPPKQ9H8X2 491 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 OPTCQ9UBM4 332 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 GPN3Q9UHW5 284 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-204ENST00000526430 SH3BGRL2Q9UJC5 107 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 SERTAD3Q9UJW9 196 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 FBXL4Q9UKA2 621 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 PLCL2Q9UPR0 1127 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 MRPS2Q9Y399 296 aaKnown RBP10.3□□□□□ -0.76
NEDD8-204ENST00000526430 RNF11Q9Y3C5 154 aa10.3□□□□□ -0.76
NEDD8-204ENST00000526430 TNPO3Q9Y5L0 923 aaKnown RBP10.3□□□□□ -0.76
NEDD8-204ENST00000526430 TRAV17A0A0B4J275 112 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 TRBC2A0A5B9 178 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 TMEM120BA0PK00 339 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 KIAA1324LA8MWY0 1029 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-204ENST00000526430 C4orf51C9J302 202 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 ZNF749O43361 778 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 SRPX2O60687 465 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-204ENST00000526430 CCNDBP1O95273 360 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 CRYABP02511 175 aaKnown RBP10.29□□□□□ -0.76
NEDD8-204ENST00000526430 STATHP02808 62 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 S100BP04271 92 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-204ENST00000526430 C8BP07358 591 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 MYL2P10916 166 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 EPB42P16452 691 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 TAC1P20366 129 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 MMP11P24347 488 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 SERPINB4P48594 390 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 NAGLUP54802 743 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 WASHC2DQ5SRD0 308 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 MLIPQ5VWP3 458 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 MRPL14Q6P1L8 145 aaKnown RBP10.29□□□□□ -0.76
NEDD8-204ENST00000526430 TMPRSS11BQ86T26 416 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 SLC22A9Q8IVM8 553 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 TMEM151BQ8IW70 566 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 LAS2Q8IYD9 372 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 CATSPER1Q8NEC5 780 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 OR4F6Q8NGB9 312 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 PROKR1Q8TCW9 393 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 TRPC4APQ8TEL6 797 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 PKNOX2Q96KN3 472 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 CAPS2Q9BXY5 557 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 ZNF395Q9H8N7 513 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-204ENST00000526430 SEMA4BQ9NPR2 832 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-204ENST00000526430 DYRK1BQ9Y463 629 aa10.29□□□□□ -0.76
NEDD8-204ENST00000526430 PHF3Q92576 2039 aaKnown RBP10.29□□□□□ -0.76
NEDD8-204ENST00000526430 H3BQF6 201 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 TM9SF1O15321 606 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 ITM2AO43736 263 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 OR1F1O43749 312 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 TRIM13O60858 407 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 CNOT3O75175 753 aaKnown RBP10.28□□□□□ -0.76
NEDD8-204ENST00000526430 DNAJB6O75190 326 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 SUPT7LO94864 414 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 SMIM10L1P0DMW3 83 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 EZRP15311 586 aaKnown RBP10.28□□□□□ -0.76
NEDD8-204ENST00000526430 MST1P26927 711 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 TNFSF10P50591 281 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 FOXA1P55317 472 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 VSX2P58304 361 aaPredicted RBP10.28□□□□□ -0.76
NEDD8-204ENST00000526430 IRF8Q02556 426 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 PCOLCEQ15113 449 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 C3AR1Q16581 482 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 HKDC1Q2TB90 917 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 XKR6Q5GH73 641 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 ZC3H12BQ5HYM0 836 aaKnown RBP10.28□□□□□ -0.76
NEDD8-204ENST00000526430 LIPMQ5VYY2 423 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 RHBDD2Q6NTF9 364 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 LETMD1Q6P1Q0 360 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 Q6ZPB1 254 aaPredicted RBP10.28□□□□□ -0.76
NEDD8-204ENST00000526430 RNF175Q8N4F7 328 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 SNX31Q8N9S9 440 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 KCT2Q8NC54 265 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 WDR20Q8TBZ3 569 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 PHF10Q8WUB8 498 aaKnown RBP10.28□□□□□ -0.76
NEDD8-204ENST00000526430 ARSGQ96EG1 525 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 PTCD3Q96EY7 689 aaKnown RBP10.28□□□□□ -0.76
NEDD8-204ENST00000526430 SMIM10Q96HG1 83 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 NDC1Q9BTX1 674 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 RHBGQ9H310 441 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 KLHL31Q9H511 634 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 SLC22A11Q9NSA0 550 aa10.28□□□□□ -0.76
NEDD8-204ENST00000526430 IFT80Q9P2H3 777 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms