RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 TTC29Q8NA56 475 aaPredicted RBP16.34■□□□□ 0.21
CCS-204ENST00000526066 SRFBP1Q8NEF9 429 aaKnown RBP16.34■□□□□ 0.21
CCS-204ENST00000526066 C19orf60Q96EN9 201 aa16.34■□□□□ 0.21
CCS-204ENST00000526066 METTL2AQ96IZ6 378 aaKnown RBP16.34■□□□□ 0.21
CCS-204ENST00000526066 HBEGFQ99075 208 aa16.34■□□□□ 0.21
CCS-204ENST00000526066 SIKE1Q9BRV8 207 aa16.34■□□□□ 0.21
CCS-204ENST00000526066 ACPTQ9BZG2 426 aa16.34■□□□□ 0.21
CCS-204ENST00000526066 SPRTNQ9H040 489 aaPredicted RBP16.34■□□□□ 0.21
CCS-204ENST00000526066 RUVBL1Q9Y265 456 aaKnown RBP16.34■□□□□ 0.21
CCS-204ENST00000526066 CCL27Q9Y4X3 112 aa16.34■□□□□ 0.21
CCS-204ENST00000526066 USH1CQ9Y6N9 552 aa16.34■□□□□ 0.21
CCS-204ENST00000526066 GMNCA6NCL1 334 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 ZNF195O14628 629 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 RGS14O43566 566 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 SKAP2O75563 359 aaPredicted RBP16.33■□□□□ 0.2
CCS-204ENST00000526066 RSL1D1O76021 490 aaKnown RBP16.33■□□□□ 0.2
CCS-204ENST00000526066 ETHE1O95571 254 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 CTSBP07858 339 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 HNRNPH1P31943 449 aaKnown RBP16.33■□□□□ 0.2
CCS-204ENST00000526066 GCGRP47871 477 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 RRADP55042 308 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 TGM3Q08188 693 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 EIF2S3LQ2VIR3 472 aaKnown RBP16.33■□□□□ 0.2
CCS-204ENST00000526066 FAM214AQ32MH5 1076 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 JMJD6Q6NYC1 403 aaPredicted RBP16.33■□□□□ 0.2
CCS-204ENST00000526066 SCIMPQ6UWF3 145 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 RNF175Q8N4F7 328 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 KCT2Q8NC54 265 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 OR2L5Q8NG80 312 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 STON2Q8WXE9 905 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 GAL3ST3Q96A11 431 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 MS4A6EQ96DS6 147 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 CENPKQ9BS16 269 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 SLC7A5P2Q9GIP4 190 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 REXO4Q9GZR2 422 aaKnown RBP16.33■□□□□ 0.2
CCS-204ENST00000526066 AICDAQ9GZX7 198 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 OR51B5Q9H339 312 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 MEAF6Q9HAF1 191 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 PRM3Q9NNZ6 103 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 RIC8BQ9NVN3 520 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 VPS29Q9UBQ0 182 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 SLC12A4Q9UP95 1085 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 SLC22A7Q9Y694 548 aa16.33■□□□□ 0.2
CCS-204ENST00000526066 MDC1Q14676 2089 aaKnown RBP16.33■□□□□ 0.2
CCS-204ENST00000526066 HYKKA2RU49 373 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 SHOX2O60902 331 aaPredicted RBP16.32■□□□□ 0.2
CCS-204ENST00000526066 STATHP02808 62 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 JUNP05412 331 aaKnown RBP16.32■□□□□ 0.2
CCS-204ENST00000526066 LINC00032P0C843 101 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 SMIM10L1P0DMW3 83 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 TROVE2P10155 538 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCS-204ENST00000526066 ARSFP54793 590 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 CACNA1DQ01668 2161 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 FAM53BQ14153 422 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 NDUFA9Q16795 377 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 IMPG1Q17R60 797 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 MUM1Q2TAK8 710 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 TOR1AIP1Q5JTV8 583 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 NIPAL1Q6NVV3 410 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 Q6ZSR9 355 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 ABHD13Q7L211 337 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 OR2T11Q8NH01 316 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 CLIP3Q96DZ5 547 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 SMIM10Q96HG1 83 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 F2RL3Q96RI0 385 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 MACROD1Q9BQ69 325 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 MFRPQ9BY79 579 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 NUF2Q9BZD4 464 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 IRAK4Q9NWZ3 460 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 GPR83Q9NYM4 423 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 AHSPQ9NZD4 102 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 LUZP4Q9P127 313 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 SRPK3Q9UPE1 567 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 SHANK1Q9Y566 2161 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 PTGDR2Q9Y5Y4 395 aa16.32■□□□□ 0.2
CCS-204ENST00000526066 SDHDO14521 159 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 HBQ1P09105 142 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 ALOX12P18054 663 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 TSFMP43897 325 aaKnown RBP16.31■□□□□ 0.2
CCS-204ENST00000526066 SEC24CP53992 1094 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 HMGCS1Q01581 520 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 TBL3Q12788 808 aaKnown RBP16.31■□□□□ 0.2
CCS-204ENST00000526066 MRPL49Q13405 166 aaKnown RBP16.31■□□□□ 0.2
CCS-204ENST00000526066 ELOAQ14241 798 aaKnown RBP16.31■□□□□ 0.2
CCS-204ENST00000526066 HERC3Q15034 1050 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 TRIM40Q6P9F5 258 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 ABHD17CQ6PCB6 329 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 MED25Q71SY5 747 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 MAVSQ7Z434 540 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 UBE3DQ7Z6J8 389 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 METTL4Q8N3J2 472 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 ENDOVQ8N8Q3 282 aaKnown RBP16.31■□□□□ 0.2
CCS-204ENST00000526066 TMEM102Q8N9M5 508 aaPredicted RBP16.31■□□□□ 0.2
CCS-204ENST00000526066 UTP15Q8TED0 518 aaKnown RBP16.31■□□□□ 0.2
CCS-204ENST00000526066 PNPLA2Q96AD5 504 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 RGMAQ96B86 450 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 MVB12AQ96EY5 273 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 MAELQ96JY0 434 aaKnown RBP16.31■□□□□ 0.2
CCS-204ENST00000526066 PPP3R2Q96LZ3 170 aa16.31■□□□□ 0.2
CCS-204ENST00000526066 C10orf90Q96M02 699 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms