RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 PEX11GQ96HA9 241 aa19.58■□□□□ 0.72
CD44-222ENST00000526025 HBEGFQ99075 208 aa19.58■□□□□ 0.72
CD44-222ENST00000526025 MRPL1Q9BYD6 325 aaKnown RBP19.58■□□□□ 0.72
CD44-222ENST00000526025 TUBB1Q9H4B7 451 aa19.58■□□□□ 0.72
CD44-222ENST00000526025 LANCL2Q9NS86 450 aa19.58■□□□□ 0.72
CD44-222ENST00000526025 KCMF1Q9P0J7 381 aa19.58■□□□□ 0.72
CD44-222ENST00000526025 PHF11Q9UIL8 331 aa19.58■□□□□ 0.72
CD44-222ENST00000526025 MRPS33Q9Y291 106 aaKnown RBP19.58■□□□□ 0.72
CD44-222ENST00000526025 CCL27Q9Y4X3 112 aa19.58■□□□□ 0.72
CD44-222ENST00000526025 LAMA5O15230 3695 aa19.57■□□□□ 0.72
CD44-222ENST00000526025 RGS14O43566 566 aa19.57■□□□□ 0.72
CD44-222ENST00000526025 MMP11P24347 488 aa19.57■□□□□ 0.72
CD44-222ENST00000526025 RPL14P50914 215 aaKnown RBP19.57■□□□□ 0.72
CD44-222ENST00000526025 OLR1P78380 273 aa19.57■□□□□ 0.72
CD44-222ENST00000526025 OCRLQ01968 901 aa19.57■□□□□ 0.72
CD44-222ENST00000526025 ST3GAL2Q16842 350 aa19.57■□□□□ 0.72
CD44-222ENST00000526025 IMPG1Q17R60 797 aa19.57■□□□□ 0.72
CD44-222ENST00000526025 QSOX2Q6ZRP7 698 aa19.57■□□□□ 0.72
CD44-222ENST00000526025 ZNF781Q8N8C0 355 aa19.57■□□□□ 0.72
CD44-222ENST00000526025 FAM76AQ8TAV0 307 aa19.57■□□□□ 0.72
CD44-222ENST00000526025 THAP4Q8WY91 577 aa19.57■□□□□ 0.72
CD44-222ENST00000526025 ZNF75CPQ92670 426 aaPredicted RBP19.57■□□□□ 0.72
CD44-222ENST00000526025 CRB3Q9BUF7 120 aa19.57■□□□□ 0.72
CD44-222ENST00000526025 SOX17Q9H6I2 414 aaPredicted RBP19.57■□□□□ 0.72
CD44-222ENST00000526025 ZNF395Q9H8N7 513 aaPredicted RBP19.57■□□□□ 0.72
CD44-222ENST00000526025 WDR70Q9NW82 654 aa19.57■□□□□ 0.72
CD44-222ENST00000526025 MMACHCQ9Y4U1 282 aa19.57■□□□□ 0.72
CD44-222ENST00000526025 EPG5Q9HCE0 2579 aa19.57■□□□□ 0.72
CD44-222ENST00000526025 A0A1W2PQ72 361 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 IDSB3KWA1 339 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 TMEM233B4DJY2 109 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 CYR61O00622 381 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 DNAJB6O75190 326 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 EEDO75530 441 aaKnown RBP19.56■□□□□ 0.72
CD44-222ENST00000526025 TPP2P29144 1249 aaPredicted RBP19.56■□□□□ 0.72
CD44-222ENST00000526025 GSTM5P46439 218 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 TRA2BP62995 288 aaKnown RBP19.56■□□□□ 0.72
CD44-222ENST00000526025 HMGCS1Q01581 520 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 ACSM2AQ08AH3 577 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 CDC20Q12834 499 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 SLAMF1Q13291 335 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 IL10RAQ13651 578 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 XKR7Q5GH72 579 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 FAM219BQ5XKK7 198 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 ACSM2BQ68CK6 577 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 CYP20A1Q6UW02 462 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 ZNF595Q8IYB9 648 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 C1orf52Q8N6N3 182 aaKnown RBP19.56■□□□□ 0.72
CD44-222ENST00000526025 PLPP5Q8NEB5 264 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 C7orf57Q8NEG2 295 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 LRRC8CQ8TDW0 803 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 DYDC1Q8WWB3 177 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 VPS50Q96JG6 964 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 CATSPER2Q96P56 530 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 SORBS1Q9BX66 1292 aaKnown RBP19.56■□□□□ 0.72
CD44-222ENST00000526025 PRDM9Q9NQV7 894 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 MCM8Q9UJA3 840 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 C3orf18Q9UK00 162 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 FIS1Q9Y3D6 152 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 ASB4Q9Y574 426 aa19.56■□□□□ 0.72
CD44-222ENST00000526025 ARHGAP10A1A4S6 786 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 GUCY1B2O75343 617 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 HEXBP07686 556 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 HK2P52789 917 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 EMP2P54851 167 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 TMEM205Q6UW68 189 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 SCIMPQ6UWF3 145 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 RGS9BPQ6ZS82 235 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 Q6ZSR9 355 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 GPR180Q86V85 440 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 LAPTM4BQ86VI4 370 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 AGR3Q8TD06 166 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 MAGEB18Q96M61 343 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 C7orf26Q96N11 449 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 MAPKAP1Q9BPZ7 522 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 VN1R1Q9GZP7 353 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 MKL2Q9ULH7 1088 aa19.55■□□□□ 0.72
CD44-222ENST00000526025 SLCO1B7G3V0H7 640 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 CLDN4O14493 209 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 PIP5K1BO14986 540 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 NKX2-8O15522 239 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 TMPRSS11DO60235 418 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 JRKO75564 520 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 KLK1P06870 262 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 FAM58BPP0C7Q3 252 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 TLX1P31314 330 aaPredicted RBP19.54■□□□□ 0.72
CD44-222ENST00000526025 HSD17B7P56937 341 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 RHAGQ02094 409 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 TNFRSF17Q02223 184 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 CCNYL2Q5T2Q4 361 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 PPP1R32Q7Z5V6 425 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 DDIASQ8IXT1 998 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 CKAP2Q8WWK9 683 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 APIPQ96GX9 242 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 CPNE5Q9HCH3 593 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 C1orf109Q9NX04 203 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 POLHQ9Y253 713 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 WBP11Q9Y2W2 641 aaKnown RBP19.54■□□□□ 0.72
CD44-222ENST00000526025 TMED5Q9Y3A6 229 aa19.54■□□□□ 0.72
CD44-222ENST00000526025 ZZEF1O43149 2961 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms