RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 SULF2Q8IWU5 870 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 ZFP62Q8NB50 900 aaPredicted RBP13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 ARMC2Q8NEN0 867 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 TTLQ8NG68 377 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 VPS39Q96JC1 886 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 EGFL8Q99944 293 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 TMEM79Q9BSE2 394 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 PITHD1Q9GZP4 211 aaPredicted RBP13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 DERL2Q9GZP9 239 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 ENKD1Q9H0I2 346 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 EHD1Q9H4M9 534 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 GPAMQ9HCL2 828 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 CTNNAL1Q9UBT7 734 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 KLF13Q9Y2Y9 288 aaPredicted RBP13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 HRH3Q9Y5N1 445 aa13.11□□□□□ -0.31
HMBOX1-209ENST00000522468 INTS1Q8N201 2190 aaKnown RBP13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 A0A0G2JN53 185 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 CYR61O00622 381 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 FCHO1O14526 889 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 ERI3O43414 337 aaKnown RBP13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 ITGA10O75578 1167 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 PIAS1O75925 651 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 C1QAP02745 245 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 RAB38P57729 211 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 PDIA2Q13087 525 aaKnown RBP13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 E2F2Q14209 437 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 ZDHHC24Q6UX98 284 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 C3P1Q6ZMU1 363 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 MARVELD2Q8N4S9 558 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 OR2L5Q8NG80 312 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 FBXO25Q8TCJ0 367 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 NCLNQ969V3 563 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 TMEM125Q96AQ2 219 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 WDR34Q96EX3 536 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 VMP1Q96GC9 406 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 SPOCK3Q9BQ16 436 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 PRTFDC1Q9NRG1 225 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 GPRC5BQ9NZH0 403 aa13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 ZNF490Q9ULM2 529 aaPredicted RBP13.1□□□□□ -0.31
HMBOX1-209ENST00000522468 KLRC4-KLRK1H3BQV0 150 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 PRRG2O14669 202 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 PEX1O43933 1283 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 EPORP19235 508 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 CD22P20273 847 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 RFC3P40938 356 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 NR0B1P51843 470 aaKnown RBP13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 LIM2P55344 173 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 KRTAP10-9P60411 292 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 CDKL4Q5MAI5 379 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 ABHD17CQ6PCB6 329 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 C16orf47Q6ZP98 133 aaPredicted RBP13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 ZNF595Q8IYB9 648 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 CYP4Z2PQ8N1L4 340 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 MYRIPQ8NFW9 859 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 FAM57AQ8TBR7 257 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 FAR2Q96K12 515 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 CSF3RQ99062 836 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 ADAP2Q9NPF8 381 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 PRDM7Q9NQW5 492 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 PNO1Q9NRX1 252 aaKnown RBP13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 DEPPQ9NTK1 212 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 ZDHHC18Q9NUE0 388 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 NSMCE4AQ9NXX6 385 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 MTRF1LQ9UGC7 380 aaKnown RBP13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 NFU1Q9UMS0 254 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 DAPP1Q9UN19 280 aa13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 MTO1Q9Y2Z2 717 aaKnown RBP13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 ZNF469Q96JG9 3925 aaPredicted RBP13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 HRNRQ86YZ3 2850 aaPredicted RBP13.09□□□□□ -0.31
HMBOX1-209ENST00000522468 A0A1B0GTH9 108 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 CXorf49A8MYA2 514 aaPredicted RBP13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 TFECO14948 347 aaPredicted RBP13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 B3GALT2O43825 422 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 HS6ST1O60243 411 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 H2AFYO75367 372 aaKnown RBP13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 CD1DP15813 335 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 IGFBP2P18065 325 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 CERS1P27544 350 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 PTGS2P35354 604 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 POU4F1Q01851 419 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 OR4D1Q15615 310 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 ELAVL1Q15717 326 aaKnown RBP13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 ZKSCAN8Q15776 578 aaPredicted RBP13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 XKR6Q5GH73 641 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 EMC4Q5J8M3 183 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 FRA10AC1Q70Z53 315 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 ZBED8Q8IZ13 594 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 KRT78Q8N1N4 520 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 TCAIMQ8N3R3 496 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 SPATA6LQ8N4H0 392 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 TMEM156Q8N614 296 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 PDPRQ8NCN5 879 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 PTPMT1Q8WUK0 201 aaPredicted RBP13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 C14orf79Q96F83 325 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 UBXN10Q96LJ8 280 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 SERINC2Q96SA4 455 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 CAPS2Q9BXY5 557 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 PARD6BQ9BYG5 372 aa13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 REXO4Q9GZR2 422 aaKnown RBP13.08□□□□□ -0.32
HMBOX1-209ENST00000522468 CAB39LQ9H9S4 337 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms