RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 ST14Q9Y5Y6 855 aa10.84□□□□□ -0.67
CLK4-206ENST00000520878 COL4A4P53420 1690 aaPredicted RBP10.83□□□□□ -0.68
CLK4-206ENST00000520878 RNASET2O00584 256 aaKnown RBP10.83□□□□□ -0.68
CLK4-206ENST00000520878 ADAMDEC1O15204 470 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 EGFP01133 1207 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 ZNF182P17025 639 aaPredicted RBP10.83□□□□□ -0.68
CLK4-206ENST00000520878 ITGA2P17301 1181 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 ACADLP28330 430 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 EPHA2P29317 976 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 CDK9P50750 372 aaKnown RBP10.83□□□□□ -0.68
CLK4-206ENST00000520878 HYAL1Q12794 435 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 LSAMPQ13449 338 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 CLCA4Q14CN2 919 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 TMEM196Q5HYL7 178 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 ADAMTSL4Q6UY14 1074 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 ZNF605Q86T29 641 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 OR52N2Q8NGI0 321 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 OR5D16Q8NGK9 328 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 CCL4L1Q8NHW4 92 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 SLC9A6Q92581 669 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 BTBD1Q9H0C5 482 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 MAGIXQ9H6Y5 334 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 SPATA7Q9P0W8 599 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 NFKBIL1Q9UBC1 381 aaPredicted RBP10.83□□□□□ -0.68
CLK4-206ENST00000520878 TNNI3P19429 210 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 ACSL1P33121 698 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 HSD17B2P37059 387 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 PIK3CBP42338 1070 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 RPP38P78345 283 aaKnown RBP10.83□□□□□ -0.68
CLK4-206ENST00000520878 ADARB1P78563 741 aaKnown RBP10.83□□□□□ -0.68
CLK4-206ENST00000520878 MTAPQ13126 283 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 APOFQ13790 326 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 MYBPC3Q14896 1274 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 RAB30Q15771 203 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 ZNF750Q32MQ0 723 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 NDUFAF5Q5TEU4 345 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 CBLL1Q75N03 491 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 OR4N5Q8IXE1 308 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 CCDC3Q9BQI4 270 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 CXorf36Q9H7Y0 433 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 EXOSC4Q9NPD3 245 aaKnown RBP10.83□□□□□ -0.68
CLK4-206ENST00000520878 USE1Q9NZ43 259 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 ERVK-18Q9QC07 812 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 SEC16AO15027 2179 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 UPK1AO00322 258 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 FOXE1O00358 373 aaPredicted RBP10.83□□□□□ -0.68
CLK4-206ENST00000520878 BMP10O95393 424 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 SOX14O95416 240 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 ASGR2P07307 311 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 C7P10643 843 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 STT3AP46977 705 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 HLCSP50747 726 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 RNF144AP50876 292 aaPredicted RBP10.83□□□□□ -0.68
CLK4-206ENST00000520878 DAPP51397 102 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 PPP2CBP62714 309 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 PPP2CAP67775 309 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 ZNF33BQ06732 778 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 SYT16Q17RD7 645 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 EXOC3L2Q2M3D2 409 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 ARMC6Q6NXE6 501 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 ZNF773Q6PK81 442 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 MSANTD1Q6ZTZ1 278 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 WDR53Q7Z5U6 358 aaPredicted RBP10.83□□□□□ -0.68
CLK4-206ENST00000520878 TAF8Q7Z7C8 310 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 SLC5A8Q8N695 610 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 ANKRD53Q8N9V6 530 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 OR9Q2Q8NGE9 314 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 RPLP0P6Q8NHW5 317 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 OR2M4Q96R27 311 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 IL4I1Q96RQ9 567 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 NPLQ9BXD5 320 aaPredicted RBP10.83□□□□□ -0.68
CLK4-206ENST00000520878 MIR1-1HGQ9H1L0 117 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 EHD1Q9H4M9 534 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 SEMA3GQ9NS98 782 aa10.83□□□□□ -0.68
CLK4-206ENST00000520878 ZFR2Q9UPR6 939 aaKnown RBP10.83□□□□□ -0.68
CLK4-206ENST00000520878 TCRBV21S2A2A0A5A6 115 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 PCSK2P16519 638 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 TYRP1P17643 537 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 TTKP33981 857 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 ILF3Q12906 894 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLK4-206ENST00000520878 GAB4Q2WGN9 574 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 SHQ1Q6PI26 577 aaKnown RBP10.82□□□□□ -0.68
CLK4-206ENST00000520878 DGLUCYQ7Z3D6 616 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 ADCK1Q86TW2 530 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 KRT73Q86Y46 540 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 KLHDC8AQ8IYD2 350 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 AMER3Q8N944 861 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 MRPL38Q96DV4 380 aaKnown RBP10.82□□□□□ -0.68
CLK4-206ENST00000520878 SLC35G5Q96KT7 338 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 YIPF2Q9BWQ6 316 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 RSPH9Q9H1X1 276 aaPredicted RBP10.82□□□□□ -0.68
CLK4-206ENST00000520878 ANKRA2Q9H9E1 313 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 SPHK1Q9NYA1 384 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 CABIN1Q9Y6J0 2220 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 TRBV5-3A0A0A0MS03 114 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 LOC100506127A0A0U1RQW1 187 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 BTN3A3O00478 584 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 SCN2BO60939 215 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 LILRB5O75023 590 aa10.82□□□□□ -0.68
CLK4-206ENST00000520878 HOXB3P14651 431 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms