RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 SEPT10Q9P0V9 454 aa6.71□□□□□ -1.34
SDCBP-208ENST00000520228 NDRG3Q9UGV2 375 aa6.71□□□□□ -1.34
SDCBP-208ENST00000520228 GUCA1BQ9UMX6 200 aa6.71□□□□□ -1.34
SDCBP-208ENST00000520228 CAMK2AQ9UQM7 478 aa6.71□□□□□ -1.34
SDCBP-208ENST00000520228 MYO18AQ92614 2054 aaKnown RBP6.71□□□□□ -1.34
SDCBP-208ENST00000520228 ABCA7Q8IZY2 2146 aa6.71□□□□□ -1.34
SDCBP-208ENST00000520228 DMXL1Q9Y485 3027 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 A0A1W2PPH5 198 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 HSPB2A8KAH6 182 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 A8MX80 341 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 MIF4GDA9UHW6 222 aaKnown RBP6.7□□□□□ -1.34
SDCBP-208ENST00000520228 FPGTO14772 594 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 TM7SF2O76062 418 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 SOX30O94993 753 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 PGLSO95336 258 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 HLA-DQB2P05538 268 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 PTMAP06454 111 aaKnown RBP6.7□□□□□ -1.34
SDCBP-208ENST00000520228 CCDC175P0C221 793 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 ZNF883P0CG24 379 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 THEGLP0DJG4 465 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 UBL4AP11441 157 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 CD59P13987 128 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 CSRP1P21291 193 aaKnown RBP6.7□□□□□ -1.34
SDCBP-208ENST00000520228 CA4P22748 312 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 NFKBIAP25963 317 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 MMP12P39900 470 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 ARRB1P49407 418 aaPredicted RBP6.7□□□□□ -1.34
SDCBP-208ENST00000520228 NOVA1P51513 510 aaKnown RBP6.7□□□□□ -1.34
SDCBP-208ENST00000520228 SEMG2Q02383 582 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 NIPAL4Q0D2K0 466 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 TRAF2Q12933 501 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 ZBTB17Q13105 803 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 GPR18Q14330 331 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 HSPB2Q16082 182 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 AWAT2Q6E213 333 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 GCNT7Q6ZNI0 430 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 Q6ZSR6 202 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 TRILQ7L0X0 811 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 ABI3BPQ7Z7G0 1075 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 PATL1Q86TB9 770 aaKnown RBP6.7□□□□□ -1.34
SDCBP-208ENST00000520228 GPAT4Q86UL3 456 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 NDUFAF2Q8N183 169 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 DENND6BQ8NEG7 585 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 DEFB124Q8NES8 71 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 ARRDC2Q8TBH0 407 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 UBE2Q2Q8WVN8 375 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 ANP32BQ92688 251 aaKnown RBP6.7□□□□□ -1.34
SDCBP-208ENST00000520228 CENPTQ96BT3 561 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 HAUS1Q96CS2 278 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 BMFQ96LC9 184 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 APOLD1Q96LR9 279 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 AGAP3Q96P47 875 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 KLF6Q99612 283 aaPredicted RBP6.7□□□□□ -1.34
SDCBP-208ENST00000520228 IL12RB2Q99665 862 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 OSBPL8Q9BZF1 889 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 ERVMER34-1Q9H9K5 563 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 LZTFL1Q9NQ48 299 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 FANCMQ8IYD8 2048 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 GON4LQ3T8J9 2241 aa6.7□□□□□ -1.34
SDCBP-208ENST00000520228 CKAP5Q14008 2032 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 CACNA1AO00555 2505 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 NCOR2Q9Y618 2525 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 A0A1B0GTQ1 180 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 RPS10-NUDT3A0A1W2PQS6 291 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 HACD1B0YJ81 288 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 MS4A18H0YCH9 400 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 H7C0C1 242 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 APOC4-APOC2K7ER74 178 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 IFNL4K9M1U5 179 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 TNFRSF13BO14836 293 aaPredicted RBP6.69□□□□□ -1.34
SDCBP-208ENST00000520228 YKT6O15498 198 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 SH3BP5O60239 455 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 KCNK5O95279 499 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 APOC2P02655 101 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 IGKV2-30P06310 120 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 CEACAM1P13688 526 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 PTPN3P26045 913 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 CD86P42081 329 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 RABIFP47224 123 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 ATP5OP48047 213 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 RXRGP48443 463 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 PMS2P54278 862 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 RPL26P61254 145 aaKnown RBP6.69□□□□□ -1.34
SDCBP-208ENST00000520228 ADORA2A-AS1P86434 159 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 CCZ1BP86790 482 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 CCZ1P86791 482 aaPredicted RBP6.69□□□□□ -1.34
SDCBP-208ENST00000520228 IL9RQ01113 521 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 XRCC4Q13426 336 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 IHHQ14623 411 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 RNPS1Q15287 305 aaKnown RBP6.69□□□□□ -1.34
SDCBP-208ENST00000520228 TSTQ16762 297 aaKnown RBP6.69□□□□□ -1.34
SDCBP-208ENST00000520228 WSCD2Q2TBF2 565 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 TEX44Q53QW1 395 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 Q6ZTK2 550 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 DPPA4Q7L190 304 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 PTAR1Q7Z6K3 402 aaPredicted RBP6.69□□□□□ -1.34
SDCBP-208ENST00000520228 NAXDQ8IW45 347 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 ACTL9Q8TC94 416 aa6.69□□□□□ -1.34
SDCBP-208ENST00000520228 SETD7Q8WTS6 366 aaKnown RBP6.69□□□□□ -1.34
SDCBP-208ENST00000520228 PIH1D2Q8WWB5 315 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms