RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 S100A14Q9HCY8 104 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 DDX28Q9NUL7 540 aaKnown RBP4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 AURKCQ9UQB9 309 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 ARID2Q68CP9 1835 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 FAM205AQ6ZU69 1335 aa4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 MYH14Q7Z406 1995 aaKnown RBP4.64□□□□□ -1.67
HMGB1P46-201ENST00000520062 A0A087WW49 117 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 hCG_38984A0A1B0GV85 526 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 SRRM4A7MD48 611 aaKnown RBP4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 TCP10L2B9ZVM9 353 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 ARPC1BO15143 372 aaKnown RBP4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 LRP3O75074 770 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 HLA-FP30511 346 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 CHRNA3P32297 505 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 FEN1P39748 380 aaKnown RBP4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 SOX3P41225 446 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 LEPRP48357 1165 aaKnown RBP4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 GEMP55040 296 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 LINC01547P58512 204 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 POLR2FP61218 127 aaKnown RBP4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 HERV-K104P63124 156 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 TAF7Q15545 349 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 OR1C1Q15619 314 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 MPPE1Q53F39 396 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 FAM76BQ5HYJ3 339 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 SPANXN4Q5MJ08 99 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 STPG1Q5TH74 334 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 HIST2H2AA3Q6FI13 130 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 RAET1GQ6H3X3 334 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 FAM53AQ6NSI3 398 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 UNC5DQ6UXZ4 953 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 DCUN1D3Q8IWE4 304 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 SLC22A15Q8IZD6 547 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 RNF148Q8N7C7 305 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 ZBTB44Q8NCP5 570 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 OR56B1Q8NGI3 324 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 MAPK15Q8TD08 544 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 SMPDL3AQ92484 453 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 ARHGAP45Q92619 1136 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 RAB39BQ96DA2 213 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 C2orf48Q96LS8 159 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 NECTIN4Q96NY8 510 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 TAAR6Q96RI8 345 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 COQ7Q99807 217 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 ASCL2Q99929 193 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 AGPAT1Q99943 283 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 SIRPDQ9H106 197 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 LIN28AQ9H9Z2 209 aaKnown RBP4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 NGBQ9NPG2 151 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 SOHLH2Q9NX45 425 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 TCF19Q9Y242 345 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 WDR37Q9Y2I8 494 aa4.63□□□□□ -1.67
HMGB1P46-201ENST00000520062 LMO7DNF2Z398 122 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 SURF4O15260 269 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 SOCS5O75159 536 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 CEACAM4O75871 244 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 GUCA1CO95843 209 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 TXNDC12O95881 172 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 HEXBP07686 556 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 HMBSP08397 361 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 CEBPBP17676 345 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 C4BPBP20851 252 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 CARTPTQ16568 116 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 HSP90AA5PQ58FG0 334 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 C1orf189Q5VU69 101 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 CAPN13Q6MZZ7 669 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 KIAA1161Q6NSJ0 714 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 IRGCQ6NXR0 463 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 FIP1L1Q6UN15 594 aaKnown RBP4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 DND1Q8IYX4 353 aaKnown RBP4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 RAB42Q8N4Z0 105 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 ARL6IP6Q8N6S5 226 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 COLGALT1Q8NBJ5 622 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 CCDC197Q8NCU1 140 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 FAM71CQ8NEG0 241 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 OR4L1Q8NH43 312 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 SMAP2Q8WU79 429 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 TMEM190Q8WZ59 177 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 AZIN2Q96A70 460 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 RPGRIP1Q96KN7 1286 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 PAPOLGQ9BWT3 736 aaKnown RBP4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 MTHFD2LQ9H903 347 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 NDUFA13Q9P0J0 144 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 COPS7AQ9UBW8 275 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 BLOC1S6Q9UL45 172 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 PLA2G4CQ9UP65 541 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 NUDCQ9Y266 331 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 OR1A2Q9Y585 309 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 ATP8B3O60423 1300 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 NEDD4P46934 1319 aa4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 GREB1LQ9C091 1923 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P46-201ENST00000520062 A0A0U1RRA0 63 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 C15orf61A6NNL5 157 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 K7EPI3 171 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 CPLX1O14810 134 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 NOL3O60936 208 aaKnown RBP4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 CSDE1O75534 798 aaKnown RBP4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 IGLV2-11P01706 119 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 CD48P09326 243 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 TPBGLP0DKB5 382 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms