RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 APOLD1Q96LR9 279 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 COQ10AQ96MF6 247 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 TSSK3Q96PN8 268 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 TBCDQ9BTW9 1192 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 LHPPQ9H008 270 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 ZCCHC4Q9H5U6 513 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 PIF1Q9H611 641 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 TMEM38AQ9H6F2 299 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 ZDHHC6Q9H6R6 413 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 FANCEQ9HB96 536 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 ANKHQ9HCJ1 492 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 CCNB1IP1Q9NPC3 277 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 PCDH12Q9NPG4 1184 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 NECTIN3Q9NQS3 549 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 SPHK2Q9NRA0 654 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 THSD1Q9NS62 852 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 PLCXD1Q9NUJ7 323 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 TBC1D23Q9NUY8 699 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 FKBP14Q9NWM8 211 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 RHBDL2Q9NX52 303 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 STOX2Q9P2F5 926 aaPredicted RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 CRNNQ9UBG3 495 aaPredicted RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 ZNF282Q9UDV7 671 aaPredicted RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 MBD1Q9UIS9 605 aaPredicted RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 GPR160Q9UJ42 338 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 ERVK-11Q9UQG0 969 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 SLC22A14Q9Y267 594 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 SLC27A6Q9Y2P4 619 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 WBP11Q9Y2W2 641 aaKnown RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 TPRKBQ9Y3C4 175 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 ORC6Q9Y5N6 252 aa4.84□□□□□ -1.63
SDC2-204ENST00000519914 MAGED1Q9Y5V3 778 aaPredicted RBP4.84□□□□□ -1.63
SDC2-204ENST00000519914 TCF20Q9UGU0 1960 aaKnown RBP4.83□□□□□ -1.64
SDC2-204ENST00000519914 PABPN1LA6NDY0 278 aaKnown RBP4.83□□□□□ -1.64
SDC2-204ENST00000519914 FADS2P1A8MWK0 482 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 ZNF99A8MXY4 864 aaPredicted RBP4.83□□□□□ -1.64
SDC2-204ENST00000519914 GNGT2O14610 69 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 SLC9A3R1O14745 358 aaPredicted RBP4.83□□□□□ -1.64
SDC2-204ENST00000519914 SCAMP3O14828 347 aaKnown RBP4.83□□□□□ -1.64
SDC2-204ENST00000519914 SLC22A1O15245 554 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 YY2O15391 372 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 HOXC11O43248 304 aaPredicted RBP4.83□□□□□ -1.64
SDC2-204ENST00000519914 B4GAT1O43505 415 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 HS6ST1O60243 411 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 ATG13O75143 517 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 CLPXO76031 633 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 MYO1DO94832 1006 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 C1orf105O95561 183 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 ANGPTL1O95841 491 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 BCL10O95999 233 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 SOD1P00441 154 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 TIMP1P01033 207 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 C9P02748 559 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 CTSLP07711 333 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 CLTBP09497 229 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 HNRNPA1P09651 372 aaKnown RBP eCLIP4.83□□□□□ -1.64
SDC2-204ENST00000519914 ERGP11308 486 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 MYCLP1P12525 358 aaPredicted RBP4.83□□□□□ -1.64
SDC2-204ENST00000519914 IL7RP16871 459 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 ZNF8P17098 575 aaPredicted RBP4.83□□□□□ -1.64
SDC2-204ENST00000519914 ENGP17813 658 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 M6PRP20645 277 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 CD247P20963 164 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 IDSP22304 550 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 TIA1P31483 386 aaKnown RBP eCLIP4.83□□□□□ -1.642e-7■■■□□ 17.7
SDC2-204ENST00000519914 GRK3P35626 688 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 UGT2B10P36537 528 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 HPCAL1P37235 193 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 HALP42357 657 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 RECQLP46063 649 aaPredicted RBP4.83□□□□□ -1.64
SDC2-204ENST00000519914 GSTM5P46439 218 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 YAP1P46937 504 aaKnown RBP4.83□□□□□ -1.64
SDC2-204ENST00000519914 STT3AP46977 705 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 LIMS1P48059 325 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 ARHGDIAP52565 204 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 CRYBA2P53672 197 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 IST1P53990 364 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 PCBP3P57721 371 aaKnown RBP4.83□□□□□ -1.64
SDC2-204ENST00000519914 KCNJ10P78508 379 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 RPL6Q02878 288 aaKnown RBP4.83□□□□□ -1.64
SDC2-204ENST00000519914 EEF1A2Q05639 463 aaKnown RBP4.83□□□□□ -1.64
SDC2-204ENST00000519914 DPTQ07507 201 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 ACSM2AQ08AH3 577 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 FCHO2Q0JRZ9 810 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 HSPA14Q0VDF9 509 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 AQP6Q13520 282 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 LAPTM5Q13571 262 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 RAPSNQ13702 412 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 MAD2L1BPQ15013 274 aaPredicted RBP4.83□□□□□ -1.64
SDC2-204ENST00000519914 CTF1Q16619 201 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 MEP1AQ16819 746 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 ZNF284Q2VY69 593 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 ARHGAP15Q53QZ3 475 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 SGO1Q5FBB7 561 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 FGD3Q5JSP0 725 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 TOR1AIP1Q5JTV8 583 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 UBE2UQ5VVX9 321 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 KIAA1614Q5VZ46 1190 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 PLPP4Q5VZY2 271 aa4.83□□□□□ -1.64
SDC2-204ENST00000519914 ACSM2BQ68CK6 577 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms