RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-209	ENST00000519141	NATD1	Q8N6N6	113 aa		11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	CSNK1A1L	Q8N752	337 aa		11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	AMER3	Q8N944	861 aa		11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	OR4A15	Q8NGL6	344 aa		11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	UTP15	Q8TED0	518 aa	Known RBP	11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	NCSTN	Q92542	709 aa		11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	ZDHHC12	Q96GR4	267 aa		11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	LRGUK	Q96M69	825 aa		11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	TGM7	Q96PF1	710 aa		11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	CD180	Q99467	661 aa		11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	MAP3K3	Q99759	626 aa		11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	TRIM15	Q9C019	465 aa		11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	RAB33B	Q9H082	229 aa		11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	FSCN3	Q9NQT6	498 aa		11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	LYAR	Q9NX58	379 aa	Known RBP	11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	TEX10	Q9NXF1	929 aa	Predicted RBP	11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	EPHA6	Q9UF33	1036 aa		11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	PCDHGB4	Q9UN71	923 aa		11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	NUP214	P35658	2090 aa	Predicted RBP	11.76	□□□□□ -0.53
SPIDR-209	ENST00000519141	SH3BP5	O60239	455 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	DRD2	P14416	443 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	HTR1E	P28566	365 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	CCT8	P50990	548 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	GFER	P55789	205 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	BTN3A2	P78410	334 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	MANEA	Q5SRI9	462 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	MRM1	Q6IN84	353 aa	Known RBP	11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	ZNF621	Q6ZSS3	439 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	SPATA24	Q86W54	205 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	FAM47B	Q8NA70	645 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	OR4C6	Q8NH72	309 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	SAP25	Q8TEE9	199 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	PYDC1	Q8WXC3	89 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	CIDEC	Q96AQ7	238 aa	Predicted RBP	11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	AURKB	Q96GD4	344 aa	Predicted RBP	11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	TCTN2	Q96GX1	697 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	RSRC1	Q96IZ7	334 aa	Known RBP	11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	GAREM1	Q9H706	876 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	CAPN10	Q9HC96	672 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	S100A14	Q9HCY8	104 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	PADI4	Q9UM07	663 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	VPS4A	Q9UN37	437 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	SLC6A14	Q9UN76	642 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	SNX13	Q9Y5W8	968 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	SCN3A	Q9NY46	2000 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	IGHV1OR21-1	A0A087WYE8	117 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	EVPLL	A8MZ36	301 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	ARPC2	O15144	300 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	PDPK1	O15530	556 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	CER1	O95813	267 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	C6orf47	O95873	294 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	ZCCHC18	P0CG32	403 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	MLLT3	P42568	568 aa	Predicted RBP	11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	OR1D5	P58170	312 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	VSX2	P58304	361 aa	Predicted RBP	11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	GPLD1	P80108	840 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	NR1D2	Q14995	579 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	DEFB110	Q30KQ9	67 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	AASDH	Q4L235	1098 aa	Predicted RBP	11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	TRIM61	Q5EBN2	209 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	NDUFAF5	Q5TEU4	345 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	NKAIN2	Q5VXU1	208 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	CYP2R1	Q6VVX0	501 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	DGLUCY	Q7Z3D6	616 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	PACS2	Q86VP3	889 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	PTRH1	Q86Y79	214 aa	Known RBP	11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	TNIP2	Q8NFZ5	429 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	OR2T12	Q8NG77	320 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	FAM120B	Q96EK7	910 aa	Known RBP	11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	SERINC2	Q96SA4	455 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	IKZF5	Q9H5V7	419 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	PIF1	Q9H611	641 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	FAM60A	Q9NP50	221 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	SOHLH2	Q9NX45	425 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	EHD3	Q9NZN3	535 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	ACTR3B	Q9P1U1	418 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	STX18	Q9P2W9	335 aa	Known RBP	11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	ZNF282	Q9UDV7	671 aa	Predicted RBP	11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	EGFL7	Q9UHF1	273 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	FBXW2	Q9UKT8	454 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	ANGPTL2	Q9UKU9	493 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	ASB4	Q9Y574	426 aa		11.75	□□□□□ -0.53
SPIDR-209	ENST00000519141	PCDH15	Q96QU1	1955 aa		11.74	□□□□□ -0.53
SPIDR-209	ENST00000519141		A0A1W2PRB8	838 aa		11.74	□□□□□ -0.53
SPIDR-209	ENST00000519141	PATE3	B3GLJ2	98 aa		11.74	□□□□□ -0.53
SPIDR-209	ENST00000519141	CLIC1	O00299	241 aa		11.74	□□□□□ -0.53
SPIDR-209	ENST00000519141	TXNDC9	O14530	226 aa		11.74	□□□□□ -0.53
SPIDR-209	ENST00000519141	B3GALT2	O43825	422 aa		11.74	□□□□□ -0.53
SPIDR-209	ENST00000519141	KIF1C	O43896	1103 aa	Known RBP	11.74	□□□□□ -0.53
SPIDR-209	ENST00000519141	ABCB1	P08183	1280 aa	Predicted RBP	11.74	□□□□□ -0.53
SPIDR-209	ENST00000519141	SMIM10L1	P0DMW3	83 aa		11.74	□□□□□ -0.53
SPIDR-209	ENST00000519141	ALOX12	P18054	663 aa		11.74	□□□□□ -0.53
SPIDR-209	ENST00000519141	ATP6V1B2	P21281	511 aa		11.74	□□□□□ -0.53
SPIDR-209	ENST00000519141	PPIB	P23284	216 aa	Known RBP	11.74	□□□□□ -0.53
SPIDR-209	ENST00000519141	MRPS22	P82650	360 aa	Known RBP	11.74	□□□□□ -0.53
SPIDR-209	ENST00000519141	NR0B2	Q15466	257 aa		11.74	□□□□□ -0.53
SPIDR-209	ENST00000519141	LPAL2	Q16609	132 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms