RNA–Protein interactions for RNA: ENST00000519100.5

PABPC1-209, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-209ENST00000519100 TRA2AQ13595 282 aaKnown RBP eCLIP2.55□□□□□ -2
PABPC1-209ENST00000519100 LY6DQ14210 128 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 ZNF542PQ5EBM4 170 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 ZRANB3Q5FWF4 1079 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 RIF1Q5UIP0 2472 aaKnown RBP2.55□□□□□ -2
PABPC1-209ENST00000519100 SPINK14Q6IE38 97 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 TTC27Q6P3X3 843 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 GPRIN3Q6ZVF9 776 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 CPEB2Q7Z5Q1 589 aaKnown RBP2.55□□□□□ -2
PABPC1-209ENST00000519100 AMIGO1Q86WK6 493 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 GCC2Q8IWJ2 1684 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 KLHL7Q8IXQ5 586 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 Q8N377 158 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 TCEANCQ8N8B7 351 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 Q8NBF4 154 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 LMO7Q8WWI1 1683 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 P2RX5Q93086 422 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 C2orf48Q96LS8 159 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 ALS2Q96Q42 1657 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 PARK7Q99497 189 aaKnown RBP2.55□□□□□ -2
PABPC1-209ENST00000519100 LPAR4Q99677 370 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 CITED2Q99967 270 aaPredicted RBP2.55□□□□□ -2
PABPC1-209ENST00000519100 DCTN5Q9BTE1 182 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 DGCR6LQ9BY27 220 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 WNK3Q9BYP7 1800 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 AKAP11Q9UKA4 1901 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 PRDM4Q9UKN5 801 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 RUVBL2Q9Y230 463 aaKnown RBP2.55□□□□□ -2
PABPC1-209ENST00000519100 HBS1LQ9Y450 684 aaKnown RBP2.55□□□□□ -2
PABPC1-209ENST00000519100 KLK4Q9Y5K2 254 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 SMAD5-AS1Q9Y6J3 95 aa2.55□□□□□ -2
PABPC1-209ENST00000519100 GVINP1Q7Z2Y8 2422 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 C2CD3Q4AC94 2353 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 NAV3Q8IVL0 2385 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 SCN4AP35499 1836 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 LY75O60449 1722 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 TRPM3Q9HCF6 1732 aaPredicted RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 CDC42BPGQ6DT37 1551 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 COL1A1P02452 1464 aaPredicted RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 SBNO1A3KN83 1393 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 LRPPRCP42704 1394 aaKnown RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 NEDD4P46934 1319 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 A0A087WUV0 522 aaPredicted RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 A0A087WV48 116 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 SRRM5B3KS81 715 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 C2CD4DB7Z1M9 353 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 CCDC188H7C350 402 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 WDR46O15213 610 aaKnown RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 TEX28O15482 410 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 FLRT2O43155 660 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 PGLSO95336 258 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 SLU7O95391 586 aaKnown RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 RLN1P04808 185 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 PRKAR1AP10644 381 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 EPORP19235 508 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 ZNF10P21506 573 aaPredicted RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 SHC1P29353 583 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 RBMS1P29558 406 aaKnown RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 MYL7Q01449 175 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 EFTUD2Q15029 972 aaKnown RBP eCLIP2.54□□□□□ -26e-6■■□□□ 13.1
PABPC1-209ENST00000519100 ZNF239Q16600 458 aaKnown RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 DUSP5Q16690 384 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 ALDH1L2Q3SY69 923 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 FAM174BQ3ZCQ3 159 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 NHSL2Q5HYW2 709 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 HECTD3Q5T447 861 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 FUT10Q6P4F1 479 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 TRIM65Q6PJ69 517 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 PRSS55Q6UWB4 352 aaPredicted RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 PET117Q6UWS5 81 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 METTL7BQ6UX53 244 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 SLC24A5Q71RS6 500 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 ASCL5Q7RTU5 278 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 LRRTM1Q86UE6 522 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 DZIP1Q86YF9 867 aaKnown RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 GPC2Q8N158 579 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 NHLRC2Q8NBF2 726 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 OR4C15Q8NGM1 316 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 C9orf43Q8TAL5 461 aaPredicted RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 SEPT1Q8WYJ6 367 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 GTF3AQ92664 365 aaKnown RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 CORO2AQ92828 525 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 MR1Q95460 341 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 CCDC114Q96M63 670 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 AGAP3Q96P47 875 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 BTBD9Q96Q07 612 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 USP28Q96RU2 1077 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 ADPGKQ9BRR6 497 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 ALKBH7Q9BT30 221 aaPredicted RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 INPP5KQ9BT40 448 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 PANK2Q9BZ23 570 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 WWTR1Q9GZV5 400 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 UPF3AQ9H1J1 476 aaKnown RBP2.54□□□□□ -2
PABPC1-209ENST00000519100 RNF121Q9H920 327 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 LMAN1LQ9HAT1 526 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 NUDT4Q9NZJ9 180 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 SEPT10Q9P0V9 454 aa2.54□□□□□ -2
PABPC1-209ENST00000519100 THEGQ9P2T0 379 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms