RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 SGO1Q5FBB7 561 aa20.68■□□□□ 0.9
VEGFA-217ENST00000518538 EXOC3L1Q86VI1 746 aa20.68■□□□□ 0.9
VEGFA-217ENST00000518538 ZCCHC7Q8N3Z6 543 aaKnown RBP20.68■□□□□ 0.9
VEGFA-217ENST00000518538 TSLPQ969D9 159 aa20.68■□□□□ 0.9
VEGFA-217ENST00000518538 PTCHD1Q96NR3 888 aa20.68■□□□□ 0.9
VEGFA-217ENST00000518538 SORBS1Q9BX66 1292 aaKnown RBP20.68■□□□□ 0.9
VEGFA-217ENST00000518538 ZNF717Q9BY31 904 aaPredicted RBP20.68■□□□□ 0.9
VEGFA-217ENST00000518538 BRF2Q9HAW0 419 aa20.68■□□□□ 0.9
VEGFA-217ENST00000518538 SSU72Q9NP77 194 aaKnown RBP20.68■□□□□ 0.9
VEGFA-217ENST00000518538 FARSBQ9NSD9 589 aaKnown RBP20.68■□□□□ 0.9
VEGFA-217ENST00000518538 KCMF1Q9P0J7 381 aa20.68■□□□□ 0.9
VEGFA-217ENST00000518538 MRPS33Q9Y291 106 aaKnown RBP20.68■□□□□ 0.9
VEGFA-217ENST00000518538 MANBAO00462 879 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 CLDN4O14493 209 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 UBFD1O14562 309 aaKnown RBP20.67■□□□□ 0.9
VEGFA-217ENST00000518538 KLHL41O60662 606 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 TRIM13O60858 407 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 PDYNP01213 254 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 MYZAPP0CAP1 466 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 ITGA3P26006 1051 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 HMOX2P30519 316 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 ALDH3A1P30838 453 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 BSGP35613 385 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 PGDP52209 483 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 BTG2P78543 158 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 Q0VFX4 171 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 PARP9Q8IXQ6 854 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 ZNF595Q8IYB9 648 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 FAM47BQ8NA70 645 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 METTL6Q8TCB7 284 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 CSF3RQ99062 836 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 MAPKAP1Q9BPZ7 522 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 TUBB6Q9BUF5 446 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 NUDT9Q9BW91 350 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 DDX31Q9H8H2 851 aaKnown RBP20.67■□□□□ 0.9
VEGFA-217ENST00000518538 MID1IP1Q9NPA3 183 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 ZNF71Q9NQZ8 489 aaPredicted RBP20.67■□□□□ 0.9
VEGFA-217ENST00000518538 PCDHGB7Q9Y5F8 929 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 ACTL7BQ9Y614 415 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 SPACA6W5XKT8 324 aa20.67■□□□□ 0.9
VEGFA-217ENST00000518538 MED13Q9UHV7 2174 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 IGKV3D-11A0A0A0MRZ8 115 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 K7EM74 188 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 C1QL1O75973 258 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 HSD3B1P14060 373 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 MAOAP21397 527 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 HSD3B2P26439 372 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 HSD17B7P56937 341 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 ZNF33BQ06732 778 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 SLAMF1Q13291 335 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 TCHHL1Q5QJ38 904 aaPredicted RBP20.66■□□□□ 0.9
VEGFA-217ENST00000518538 VWA5B1Q5TIE3 1220 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 FAM219BQ5XKK7 198 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 SCUBE1Q8IWY4 988 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 KBTBD2Q8IY47 623 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 TMEM52Q8NDY8 209 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 IMMP1LQ96LU5 166 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 SMAD5Q99717 465 aaKnown RBP20.66■□□□□ 0.9
VEGFA-217ENST00000518538 LHPPQ9H008 270 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 PRTFDC1Q9NRG1 225 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 SLC12A4Q9UP95 1085 aa20.66■□□□□ 0.9
VEGFA-217ENST00000518538 A0A0A6YYD5 115 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 IGHV3-20A0A0C4DH32 117 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 TCRBV16S1A1N1A0A5B0 115 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 BLACEA4D250 179 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 ULK1O75385 1050 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 SEC24DO94855 1032 aaPredicted RBP20.65■□□□□ 0.9
VEGFA-217ENST00000518538 PDGFAP04085 211 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 ICAM2P13598 275 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 NR1D1P20393 614 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 ETV4P43268 484 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 HNRNPFP52597 415 aaKnown RBP20.65■□□□□ 0.9
VEGFA-217ENST00000518538 OR4D2P58180 307 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 RAPSNQ13702 412 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 SFT2D3Q587I9 215 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 IRAK1BP1Q5VVH5 260 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 RIPOR1Q6ZS17 1223 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 ASB18Q6ZVZ8 466 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 NUDT13Q86X67 352 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 ZBTB9Q96C00 473 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 CNDP1Q96KN2 507 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 WDR77Q9BQA1 342 aaPredicted RBP20.65■□□□□ 0.9
VEGFA-217ENST00000518538 TRMOQ9BU70 441 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 MECRQ9BV79 373 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 GATA5Q9BWX5 397 aaPredicted RBP20.65■□□□□ 0.9
VEGFA-217ENST00000518538 STMN4Q9H169 189 aaPredicted RBP20.65■□□□□ 0.9
VEGFA-217ENST00000518538 NECTIN3Q9NQS3 549 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 NMRK1Q9NWW6 199 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 MS4A12Q9NXJ0 267 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 AHSPQ9NZD4 102 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 PHF11Q9UIL8 331 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 FBXW2Q9UKT8 454 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 ZNF451Q9Y4E5 1061 aa20.65■□□□□ 0.9
VEGFA-217ENST00000518538 EEDO75530 441 aaKnown RBP20.64■□□□□ 0.89
VEGFA-217ENST00000518538 ALPPP05187 535 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 SERPINA7P05543 415 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 PRR35P0CG20 571 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 CPN2P22792 545 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 AP2B1P63010 937 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 ACTN3Q08043 901 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms