RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TXN2Q99757 166 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 FAM213AQ9BRX8 229 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 TEX13BQ9BXU2 312 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 LAT2Q9GZY6 243 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 NAPBQ9H115 298 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 WDR13Q9H1Z4 485 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 TMEM245Q9H330 911 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 RWDD1Q9H446 243 aaPredicted RBP2.84□□□□□ -1.95
HERC4-215ENST00000515753 MAGEF1Q9HAY2 307 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 ZDHHC18Q9NUE0 388 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 TXNDC16Q9P2K2 825 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 CGNQ9P2M7 1197 aaKnown RBP2.84□□□□□ -1.95
HERC4-215ENST00000515753 UBQLN2Q9UHD9 624 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 EXOC7Q9UPT5 735 aa2.84□□□□□ -1.95
HERC4-215ENST00000515753 FOXA2Q9Y261 457 aaPredicted RBP2.84□□□□□ -1.95
HERC4-215ENST00000515753 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.84□□□□□ -1.95
HERC4-215ENST00000515753 FAM205AQ6ZU69 1335 aa2.84□□□□□ -1.96
HERC4-215ENST00000515753 CENPJQ9HC77 1338 aaPredicted RBP2.84□□□□□ -1.96
HERC4-215ENST00000515753 CRB1P82279 1406 aa2.84□□□□□ -1.96
HERC4-215ENST00000515753 ADGRB2O60241 1585 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 KIF1AQ12756 1690 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 SPHKAPQ2M3C7 1700 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 IGHV4-4A0A075B6R2 117 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 A0A087WW49 117 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 KLF11O14901 512 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 MCF2LO15068 1137 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 ARHGEF9O43307 516 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 NME6O75414 186 aaPredicted RBP2.83□□□□□ -1.96
HERC4-215ENST00000515753 PALMO75781 387 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 PDGFBP01127 241 aaPredicted RBP2.83□□□□□ -1.96
HERC4-215ENST00000515753 TGFAP01135 160 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 OPN1MWP04001 364 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 OPN1MW2P0DN77 364 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 OPN1MW3P0DN78 364 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 CEBPBP17676 345 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 AZU1P20160 251 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 DNAJB1P25685 340 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 RPA1P27694 616 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 PIK3R1P27986 724 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 CHRNA3P32297 505 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 PTGER4P35408 488 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 MDH1P40925 334 aaKnown RBP2.83□□□□□ -1.96
HERC4-215ENST00000515753 PDX1P52945 283 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 AKAP17AQ02040 695 aaKnown RBP2.83□□□□□ -1.96
HERC4-215ENST00000515753 SCGB2A2Q13296 93 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 PDE7AQ13946 482 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 PTGISQ16647 500 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 ZFP69Q49AA0 526 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 GTDC1Q4AE62 458 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 PDLIM3Q53GG5 364 aaPredicted RBP2.83□□□□□ -1.96
HERC4-215ENST00000515753 RIPPLY2Q5TAB7 128 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 ZNF790Q6PG37 636 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 B3GLCTQ6Y288 498 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 ZER1Q7Z7L7 766 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 NUDT13Q86X67 352 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 MEX3DQ86XN8 651 aaKnown RBP2.83□□□□□ -1.96
HERC4-215ENST00000515753 AQP12AQ8IXF9 295 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 LSMEM2Q8N112 164 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 FBXW8Q8N3Y1 598 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 ZNF843Q8N446 348 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 MAPKAPK5-AS1Q8N8E1 139 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 ZNF383Q8NA42 475 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 VANGL1Q8TAA9 524 aaPredicted RBP2.83□□□□□ -1.96
HERC4-215ENST00000515753 FGFBP3Q8TAT2 258 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 RNASE8Q8TDE3 154 aaKnown RBP2.83□□□□□ -1.96
HERC4-215ENST00000515753 SLC26A7Q8TE54 656 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 CCDC107Q8WV48 283 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 SSMEM1Q8WWF3 244 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 DHX58Q96C10 678 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 DTD2Q96FN9 168 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 GMPPAQ96IJ6 420 aaPredicted RBP2.83□□□□□ -1.96
HERC4-215ENST00000515753 ART5Q96L15 291 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 DDX47Q9H0S4 455 aaKnown RBP2.83□□□□□ -1.96
HERC4-215ENST00000515753 ATG10Q9H0Y0 220 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 SNX25Q9H3E2 840 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 GPN1Q9HCN4 374 aaPredicted RBP2.83□□□□□ -1.96
HERC4-215ENST00000515753 DNAJC4Q9NNZ3 241 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 NGBQ9NPG2 151 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 SDR39U1Q9NRG7 319 aaPredicted RBP2.83□□□□□ -1.96
HERC4-215ENST00000515753 ATAD3AQ9NVI7 634 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 OSER1Q9NX31 292 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 AATFQ9NY61 560 aaKnown RBP eCLIP2.83□□□□□ -1.96
HERC4-215ENST00000515753 PTTG2Q9NZH5 202 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 KCNK6Q9Y257 313 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 EXOC6BQ9Y2D4 811 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 PLEKHA6Q9Y2H5 1048 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 PYGO1Q9Y3Y4 419 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 U3KQV3 271 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 UBE4BO95155 1302 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 MAP3K5Q99683 1374 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 TULP4Q9NRJ4 1543 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 GLI3P10071 1580 aa2.83□□□□□ -1.96
HERC4-215ENST00000515753 LRP5O75197 1615 aa2.82□□□□□ -1.96
HERC4-215ENST00000515753 CLTCL1P53675 1640 aa2.82□□□□□ -1.96
HERC4-215ENST00000515753 USP32Q8NFA0 1604 aa2.82□□□□□ -1.96
HERC4-215ENST00000515753 SETD1AO15047 1707 aaKnown RBP2.82□□□□□ -1.96
HERC4-215ENST00000515753 A0A0B4J203 849 aa2.82□□□□□ -1.96
HERC4-215ENST00000515753 TRAV24A0A0B4J272 114 aa2.82□□□□□ -1.96
HERC4-215ENST00000515753 CLRN2A0PK11 232 aa2.82□□□□□ -1.96
HERC4-215ENST00000515753 HYKKA2RU49 373 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms