RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 COL8A1P27658 744 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 PPP2R1BP30154 601 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 SERPINB1P30740 379 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 PHBP35232 272 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 DCTP40126 519 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 CA7P43166 264 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 SERPINB8P50452 374 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 HLCSP50747 726 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 CLCN2P51788 898 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 GPR143P51810 404 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 OC90Q02509 493 aaPredicted RBP9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 SLC13A2Q13183 592 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 RCN2Q14257 317 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 SETDB1Q15047 1291 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 FAM83EQ2M2I3 478 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 TMEM35AQ53FP2 167 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 MROH9Q5TGP6 573 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 ZNF787Q6DD87 383 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 GRHL2Q6ISB3 625 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 SLC25A25Q6KCM7 469 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 GALNTL5Q7Z4T8 443 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 CLNKQ7Z7G1 428 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 ZNF227Q86WZ6 799 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 SIAH3Q8IW03 269 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 MMGT1Q8N4V1 131 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 SRFBP1Q8NEF9 429 aaKnown RBP9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 UBE2E3Q969T4 207 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 NCLNQ969V3 563 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 VMP1Q96GC9 406 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 GPR137Q96N19 417 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 TBCDQ9BTW9 1192 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 DEFB126Q9BYW3 111 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 ROGDIQ9GZN7 287 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 LYRM4Q9HD34 91 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 ADAP2Q9NPF8 381 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 PNO1Q9NRX1 252 aaKnown RBP9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 KCMF1Q9P0J7 381 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 CROCCQ5TZA2 2017 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 SCN3AQ9NY46 2000 aa9.76□□□□□ -0.85
HMGXB3-205ENST00000514469 KLK8O60259 260 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 URI1O94763 535 aaPredicted RBP9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 KLHL2O95198 593 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 MLYCDO95822 493 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 PCNAP12004 261 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 EPB42P16452 691 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 ATP5A1P25705 553 aaKnown RBP9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 CYB561P49447 251 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 ALDH6A1Q02252 535 aaKnown RBP9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 RBPJQ06330 500 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 ACAP2Q15057 778 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 ELAVL1Q15717 326 aaKnown RBP9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 MED27Q6P2C8 311 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 CEP128Q6ZU80 1094 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 FAM98AQ8NCA5 519 aaKnown RBP9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 OR7G3Q8NG95 312 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 THAP3Q8WTV1 239 aaPredicted RBP9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 ISL2Q96A47 359 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 CMTM7Q96FZ5 175 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 GPR78Q96P69 363 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 MAPKAP1Q9BPZ7 522 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 CDC42EP4Q9H3Q1 356 aaKnown RBP9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 DMGDHQ9UI17 866 aaKnown RBP9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 TSC22D4Q9Y3Q8 395 aa9.75□□□□□ -0.85
HMGXB3-205ENST00000514469 RP1L1Q8IWN7 2480 aaPredicted RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 A0A096LPK6 155 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 TRGV8A0A0C4DH27 118 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 TMEM200CA6NKL6 621 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 RTCAO00442 366 aaKnown RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 PRKNO60260 465 aaPredicted RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 UGDHO60701 494 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 SLC19A2O60779 497 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 CTNSO60931 367 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 ITGA10O75578 1167 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 GFAPP14136 432 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 HIST1H1TP22492 207 aaPredicted RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 ECHS1P30084 290 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 PIK3CBP42338 1070 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 SSR2P43308 183 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 MAGEA12P43365 314 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 ALDH18A1P54886 795 aaKnown RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 PCBP2Q15366 365 aaKnown RBP eCLIP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 UAP1Q16222 522 aaPredicted RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 MAPKAPK3Q16644 382 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 PFKFB4Q16877 469 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 KRTCAP3Q53RY4 240 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 TECRLQ5HYJ1 363 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 KHDRBS2Q5VWX1 349 aaKnown RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 LIPJQ5W064 366 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 METTL2BQ6P1Q9 378 aaKnown RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 KLC3Q6P597 504 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 Q6ZPB1 254 aaPredicted RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 CHSY3Q70JA7 882 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 TMEM132CQ8N3T6 1108 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 CPSF7Q8N684 471 aaKnown RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 TEX9Q8N6V9 391 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 ACOT4Q8N9L9 421 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 NOA1Q8NC60 698 aaKnown RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 OR14A16Q8NHC5 309 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms