RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PTGER4P35408 488 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 GP5P40197 560 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 HNRNPFP52597 415 aaKnown RBP14.34□□□□□ -0.11
TPM3-219ENST00000509409 LIM2P55344 173 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 IRF8Q02556 426 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 STX4Q12846 297 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 PDK4Q16654 411 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 PAGE2BQ5JRK9 111 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 CDKL4Q5MAI5 379 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 ABHD17CQ6PCB6 329 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 NCCRP1Q6ZVX7 275 aaPredicted RBP14.34□□□□□ -0.11
TPM3-219ENST00000509409 RAPH1Q70E73 1250 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 GDF7Q7Z4P5 450 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 SREK1Q8WXA9 508 aaKnown RBP14.34□□□□□ -0.11
TPM3-219ENST00000509409 GPR22Q99680 433 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 RBBP8Q99708 897 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 EFCAB11Q9BUY7 163 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 ALOXE3Q9BYJ1 711 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 EHD1Q9H4M9 534 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 ADAP2Q9NPF8 381 aa14.34□□□□□ -0.11
TPM3-219ENST00000509409 YARS2Q9Y2Z4 477 aaKnown RBP14.34□□□□□ -0.11
TPM3-219ENST00000509409 A0A1B0GTH9 108 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 SYNDIG1LA6NDD5 238 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 A8MVJ9 347 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 TGFBR3LH3BV60 316 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 HS6ST1O60243 411 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 CTNSO60931 367 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 PDE9AO76083 593 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 WISP3O95389 354 aaPredicted RBP14.33□□□□□ -0.12
TPM3-219ENST00000509409 TPOP07202 933 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 PCNAP12004 261 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 PTGS2P35354 604 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 GPR85P60893 370 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 RAB10P61026 200 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 CBLBQ13191 982 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 CHIT1Q13231 466 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 EFTUD2Q15029 972 aaKnown RBP eCLIP14.33□□□□□ -0.122e-18■■■■□ 20.8
TPM3-219ENST00000509409 GRTP1Q5TC63 336 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 IL20RBQ6UXL0 311 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 MDGA2Q7Z553 956 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 VN1R5Q7Z5H4 357 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 ARMC10Q8N2F6 343 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 SRFBP1Q8NEF9 429 aaKnown RBP14.33□□□□□ -0.12
TPM3-219ENST00000509409 ASB15Q8WXK1 588 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 DAZLQ92904 295 aaKnown RBP14.33□□□□□ -0.12
TPM3-219ENST00000509409 KIAA1191Q96A73 305 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 ROGDIQ9GZN7 287 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 HPF1Q9NWY4 346 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 KCMF1Q9P0J7 381 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 PTBP2Q9UKA9 531 aaKnown RBP14.33□□□□□ -0.12
TPM3-219ENST00000509409 PYCARDQ9ULZ3 195 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 PPT2Q9UMR5 302 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 DAPP1Q9UN19 280 aa14.33□□□□□ -0.12
TPM3-219ENST00000509409 TCRBV9S1A1TA0A576 114 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 FAM159BA6NKW6 160 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 E9PLN8 166 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 WWP2O00308 870 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 CYR61O00622 381 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 RAD51CO43502 376 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 PRKNO60260 465 aaPredicted RBP14.32□□□□□ -0.12
TPM3-219ENST00000509409 PRAMEF4O60810 478 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 SH3BGRLO75368 114 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 OR2J2O76002 312 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 TBX6O95947 436 aaPredicted RBP14.32□□□□□ -0.12
TPM3-219ENST00000509409 GSTA2P09210 222 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 ELAVL4P26378 380 aaKnown RBP14.32□□□□□ -0.12
TPM3-219ENST00000509409 MSH2P43246 934 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 KCNC1P48547 511 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 GPR143P51810 404 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 PLGLB1Q02325 96 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 ELAVL1Q15717 326 aaKnown RBP14.32□□□□□ -0.12
TPM3-219ENST00000509409 ADPRMQ3LIE5 342 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 PRAMEF9Q5VWM5 478 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 ADNP2Q6IQ32 1131 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 HSDL2Q6YN16 418 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 C16orf47Q6ZP98 133 aaPredicted RBP14.32□□□□□ -0.12
TPM3-219ENST00000509409 CYS1Q717R9 158 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 CCDC25Q86WR0 208 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 PPM1NQ8N819 430 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 PDPRQ8NCN5 879 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 SPATA4Q8NEY3 305 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 STAG3L4Q8TBR4 150 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 UBE2E3Q969T4 207 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 KCNC2Q96PR1 638 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 CSF3RQ99062 836 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 VKORC1Q9BQB6 163 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 CD244Q9BZW8 370 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 ALG9Q9H6U8 611 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 PRDM7Q9NQW5 492 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 COQ3Q9NZJ6 369 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 ZNF223Q9UK11 482 aaPredicted RBP14.32□□□□□ -0.12
TPM3-219ENST00000509409 PPIEQ9UNP9 301 aaKnown RBP14.32□□□□□ -0.12
TPM3-219ENST00000509409 UTP11Q9Y3A2 253 aaKnown RBP14.32□□□□□ -0.12
TPM3-219ENST00000509409 ASB1Q9Y576 335 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 SPACA6W5XKT8 324 aa14.32□□□□□ -0.12
TPM3-219ENST00000509409 LRBAP50851 2863 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 SUPT3HB4E1H0 165 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 SUPT3HO75486 399 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 FAM155BO75949 473 aa14.31□□□□□ -0.12
TPM3-219ENST00000509409 TGFB1P01137 390 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms