RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 A8MUI8 341 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 MAGEB17A8MXT2 336 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 H0YIV9 168 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 TGFBR3LH3BV60 316 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 PSMD12O00232 456 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 B4GALT2O60909 372 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 CDC123O75794 336 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 SEC24DO94855 1032 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 TGFB1P01137 390 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 JUNP05412 331 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 SERPINA7P05543 415 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 MYZAPP0CAP1 466 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 PRR35P0CG20 571 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 ALOX12P18054 663 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 GNLYP22749 145 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 SERPINB3P29508 390 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 AHRP35869 848 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 CCT5P48643 541 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 RPS13P62277 151 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 Q0VFX4 171 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 RUNX2Q13950 521 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 UBAP2LQ14157 1087 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 ELOAQ14241 798 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 TLR1Q15399 786 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 NSDHLQ15738 373 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 CPSF6Q16630 551 aaKnown RBP eCLIP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 UGT3A2Q3SY77 523 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 GGTA1PQ4G0N0 100 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 PRR30Q53SZ7 412 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 CRB2Q5IJ48 1285 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 TOR1AIP1Q5JTV8 583 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 AGBL2Q5U5Z8 902 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 LIPMQ5VYY2 423 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 METTL2BQ6P1Q9 378 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 SCIMPQ6UWF3 145 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 IGFL3Q6UXB1 125 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 HDXQ7Z353 690 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 CPEB2Q7Z5Q1 589 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 KRT78Q8N1N4 520 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 CCNYL1Q8N7R7 359 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 RDH11Q8TC12 318 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 BRIX1Q8TDN6 353 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 MTFMTQ96DP5 389 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 C19orf60Q96EN9 201 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 FAR2Q96K12 515 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 F2RL3Q96RI0 385 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 LMF1Q96S06 567 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 ZNF382Q96SR6 550 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 SORT1Q99523 831 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 MTERF1Q99551 399 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 TUBB6Q9BUF5 446 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 VN1R1Q9GZP7 353 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 OR51B5Q9H339 312 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 VIPAS39Q9H9C1 493 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 PRDM7Q9NQW5 492 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 CCL27Q9Y4X3 112 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 TNPO3Q9Y5L0 923 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 RP1L1Q8IWN7 2480 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 ANKDD1BA6NHY2 528 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 WASHC1A8K0Z3 465 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 PLPP1O14494 284 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 CHST10O43529 356 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 GALR3O60755 368 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 EEDO75530 441 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 PRKRAO75569 313 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 CLEC3AO75596 197 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 AGFG2O95081 481 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 CLDN9O95484 217 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 PDYNP01213 254 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 FHP07954 510 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 SERPINA6P08185 405 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 PCNAP12004 261 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 BGNP21810 368 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 IL10P22301 178 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 JAK1P23458 1154 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 UQCRFS1P47985 274 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 CCNG1P51959 295 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 STXBP1P61764 594 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 BTN3A2P78410 334 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 ZNF33BQ06732 778 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 MFAP5Q13361 173 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 ZNF169Q14929 603 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 ABRAXAS2Q15018 415 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 PCOLCEQ15113 449 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 HIST2H2ACQ16777 129 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 BTBD16Q32M84 506 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 FHL5Q5TD97 284 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 ABHD17BQ5VST6 288 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 LIPJQ5W064 366 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 CLEC6AQ6EIG7 209 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 HIST2H2AA3Q6FI13 130 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 MED27Q6P2C8 311 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 ABHD17CQ6PCB6 329 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 TMEM205Q6UW68 189 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 Q6ZS92 163 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 LANCL3Q6ZV70 420 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 CUZD1Q86UP6 607 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 MMP21Q8N119 569 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 FAM26EQ8N5C1 309 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms