RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PSD2Q9BQI7 771 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF577Q9BSK1 485 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 RRAGDQ9NQL2 400 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 SLC2A9Q9NRM0 540 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM248Q9NWD8 314 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 COPG2Q9UBF2 871 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 PHF11Q9UIL8 331 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 LEF1Q9UJU2 399 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-209ENST00000508871 NUP50Q9UKX7 468 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 PLEKHA6Q9Y2H5 1048 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 DUSP10Q9Y6W6 482 aa3.76□□□□□ -1.81
NEDD4-209ENST00000508871 MYMKA6NI61 221 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 RRP8O43159 456 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 PIGNO95427 931 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 RHOCP08134 193 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 MAGEB1P43366 347 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CLCNKBP51801 687 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CARD16Q5EG05 197 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 NCCRP1Q6ZVX7 275 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 AMER2Q8N7J2 671 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 PAPD5Q8NDF8 572 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SNIP1Q8TAD8 396 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 PLEKHO2Q8TD55 490 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ACER1Q8TDN7 264 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 UBASH3BQ8TF42 649 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CREB3L1Q96BA8 519 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 HMCESQ96FZ2 354 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 BTF3L4Q96K17 158 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 GFM1Q96RP9 751 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 FAM83CQ9BQN1 747 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 HDHD5Q9BXW7 423 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SLC2A4RGQ9NR83 387 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF275Q9NSD4 429 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 PRPF19Q9UMS4 504 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CASP8AP2Q9UKL3 1982 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 GNG14A0A1W2PPG7 69 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ZSCAN5BA6NJL1 495 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 PABPC4LP0CB38 370 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 FAM157BP0CG42 384 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SPATA31C1P0DKV0 1188 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 FPR1P21462 350 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 RPL13P26373 211 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CDC25CP30307 473 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 TGM4P49221 684 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 TAS2R50P59544 299 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 PTPRCAPQ14761 206 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 POU2AF1Q16633 256 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CNPY1Q3B7I2 92 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ARHGAP11BQ3KRB8 267 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 XKR6Q5GH73 641 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SPDYAQ5MJ70 313 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 C9orf135Q5VTT2 229 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM65Q6PI78 240 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF600Q6ZNG1 722 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CATSPERDQ86XM0 798 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ABRAQ8N0Z2 381 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF565Q8N9K5 539 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 MAFIPQ8WZ33 124 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 DAZAP1Q96EP5 407 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM176AQ96HP8 235 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SERAC1Q96JX3 654 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SYT17Q9BSW7 474 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 TMED9Q9BVK6 235 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ANKHQ9HCJ1 492 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 NDFIP2Q9NV92 336 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 LYARQ9NX58 379 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 UXTQ9UBK9 157 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SLC27A6Q9Y2P4 619 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 COL1A2P08123 1366 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 FRMPD3Q5JV73 1810 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ZNFX1Q9P2E3 1918 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 KDM4EB2RXH2 506 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 XRCC3O43542 346 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 GDF9O60383 454 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ITGA10O75578 1167 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 NPY2RP49146 381 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 AP2S1P53680 142 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 RAB4BP61018 213 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ABCE1P61221 599 aaKnown RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF33AQ06730 810 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 IL18R1Q13478 541 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 STXBP2Q15833 593 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF542PQ5EBM4 170 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 C11orf63Q6NUN7 778 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 MSANTD2Q6P1R3 559 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 FUT10Q6P4F1 479 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ZCCHC12Q6PEW1 402 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SIGLEC15Q6ZMC9 328 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 KMT5CQ86Y97 462 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 ERO1BQ86YB8 467 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 NDNFQ8TB73 568 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 PROKR1Q8TCW9 393 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 HPSE2Q8WWQ2 592 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 SLCO2A1Q92959 643 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 CIDECQ96AQ7 238 aaPredicted RBP3.75□□□□□ -1.81
NEDD4-209ENST00000508871 FAM122AQ96E09 287 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 MS4A14Q96JA4 679 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 WFIKKN1Q96NZ8 548 aa3.75□□□□□ -1.81
NEDD4-209ENST00000508871 HSD17B14Q9BPX1 270 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms