RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 KCNC1P48547 511 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 MEOX1P50221 254 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 MTTPP55157 894 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 RAB10P61026 200 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 SLC13A2Q13183 592 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 DOC2AQ14183 400 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 E2F2Q14209 437 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 CDSNQ15517 529 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 ZNF630Q2M218 657 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 XKR6Q5GH73 641 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 C3orf62Q6ZUJ4 267 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 NCCRP1Q6ZVX7 275 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 LRRC70Q7Z2Q7 622 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 MAATS1Q7Z4T9 603 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 FGD2Q7Z6J4 655 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 CLNKQ7Z7G1 428 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 ZNF595Q8IYB9 648 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 CYP4Z2PQ8N1L4 340 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 GHDCQ8N2G8 530 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 SNX31Q8N9S9 440 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 EXT2Q93063 718 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 SERINC2Q96SA4 455 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 EFCAB11Q9BUY7 163 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 ADAP2Q9NPF8 381 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 CD274Q9NZQ7 290 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 RNF112Q9ULX5 631 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 MRPS33Q9Y291 106 aaKnown RBP12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 KLF13Q9Y2Y9 288 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 MEMO1Q9Y316 297 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 ZNF407Q9C0G0 2248 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 CCDC168Q8NDH2 2452 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 TMEM200CA6NKL6 621 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 ENO4A6NNW6 628 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 CLDN4O14493 209 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 FAM155BO75949 473 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 GSTA2P09210 222 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 ESRRAP11474 423 aaPredicted RBP12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 ABOP16442 354 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 AGAP20933 346 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 PTGER1P34995 402 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 SPRP35270 261 aaPredicted RBP12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 DLG1Q12959 904 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 ELAVL1Q15717 326 aaKnown RBP12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 TBCCQ15814 346 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 KBTBD12Q3ZCT8 623 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 XKRXQ6PP77 449 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 ZNF793Q6ZN11 406 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 MDGA2Q7Z553 956 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 UBE3DQ7Z6J8 389 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 CMC1Q7Z7K0 106 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 SULF2Q8IWU5 870 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 MCEMP1Q8IX19 187 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 CTAGE3PQ8IX95 158 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 SRRM1Q8IYB3 904 aaKnown RBP12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 PPM1NQ8N819 430 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 POGLUT1Q8NBL1 392 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 FBXO25Q8TCJ0 367 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 UBTD2Q8WUN7 234 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 F2RL3Q96RI0 385 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 ALG9Q9H6U8 611 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 COPS7BQ9H9Q2 264 aaPredicted RBP12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 CHST11Q9NPF2 352 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 PRDM7Q9NQW5 492 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 FBXW2Q9UKT8 454 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 DNAJC13O75165 2243 aa12.11□□□□□ -0.47
HMGCS1-205ENST00000508319 ADAM10O14672 748 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 TFECO14948 347 aaPredicted RBP12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 CCNT2O60583 730 aaKnown RBP12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 SCELO95171 688 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 S100BP04271 92 aaPredicted RBP12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 RFC3P40938 356 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 CASP2P42575 452 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 PLTPP55058 493 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 IRF8Q02556 426 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 CHIT1Q13231 466 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 LAPTM5Q13571 262 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 NAA30Q147X3 362 aaPredicted RBP12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 SLMAPQ14BN4 828 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 EFTUD2Q15029 972 aaKnown RBP eCLIP12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 TRADDQ15628 312 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 PAGE2BQ5JRK9 111 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 GRTP1Q5TC63 336 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 ZDHHC24Q6UX98 284 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 C16orf47Q6ZP98 133 aaPredicted RBP12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 ISCA2Q86U28 154 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 TMEM156Q8N614 296 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 ZFP62Q8NB50 900 aaPredicted RBP12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 AGAP11Q8TF27 550 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 ZNF473Q8WTR7 871 aaKnown RBP12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 KCNC2Q96PR1 638 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 ATOH8Q96SQ7 321 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 CCDC77Q9BR77 488 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 MS4A8Q9BY19 250 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 CD244Q9BZW8 370 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 LYRM4Q9HD34 91 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 IGSF5Q9NSI5 407 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 NUDT4Q9NZJ9 180 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 KCMF1Q9P0J7 381 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 VTI1BQ9UEU0 232 aa12.1□□□□□ -0.47
HMGCS1-205ENST00000508319 CELSR1Q9NYQ6 3014 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms