RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 ZC3HC1Q86WB0 502 aaKnown RBP12.4□□□□□ -0.42
DDX41-206ENST00000506965 PALM2Q8IXS6 379 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 TMEM156Q8N614 296 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 TMEM251Q8N6I4 163 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 TRPV3Q8NET8 790 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 GAL3ST3Q96A11 431 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 ESAMQ96AP7 390 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 RHBDF1Q96CC6 855 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 CFAP36Q96G28 342 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 VMP1Q96GC9 406 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 SCYL1Q96KG9 808 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 HIST1H2AHQ96KK5 128 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 CAPZA3Q96KX2 299 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 HIST1H2AJQ99878 128 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 AIF1LQ9BQI0 150 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 H2AFJQ9BTM1 129 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 CNPPD1Q9BV87 410 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 TMUB1Q9BVT8 246 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 TP63Q9H3D4 680 aaPredicted RBP12.4□□□□□ -0.42
DDX41-206ENST00000506965 CLK4Q9HAZ1 481 aaKnown RBP12.4□□□□□ -0.42
DDX41-206ENST00000506965 PRTFDC1Q9NRG1 225 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 SMYD2Q9NRG4 433 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 COQ3Q9NZJ6 369 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 A0A0G2JNJ9 132 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 PGRMC1O00264 195 aaKnown RBP12.39□□□□□ -0.43
DDX41-206ENST00000506965 ERI3O43414 337 aaKnown RBP12.39□□□□□ -0.43
DDX41-206ENST00000506965 KLK8O60259 260 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 IGHG3P01860 377 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 C1GALT1C1LP0DN25 315 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 GLI4P10075 376 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 CCL3P10147 92 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 MAGEA5P43359 124 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 DNASE1L1P49184 302 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 FNTAP49354 379 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 ART1P52961 327 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 IST1P53990 364 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 LIM2P55344 173 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 PPIAP62937 165 aaKnown RBP12.39□□□□□ -0.43
DDX41-206ENST00000506965 KRTAP21-3Q3LHN1 58 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 FAM45BPQ6NSW5 357 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 ARHGAP11AQ6P4F7 1023 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 LYPD8Q6UX82 237 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 DGAT2L6Q6ZPD8 337 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 SEM1Q6ZVN7 128 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 SPATA6LQ8N4H0 392 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 FAM45AQ8TCE6 357 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 ACTRT1Q8TDG2 376 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 RND1Q92730 232 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 PBKQ96KB5 322 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 OSBPL9Q96SU4 736 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 TTYH2Q9BSA4 534 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 PROK2Q9HC23 129 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 PRDM7Q9NQW5 492 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 ZNF358Q9NW07 568 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 SPRR3Q9UBC9 169 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 MYOTQ9UBF9 498 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 Q9UFV3 132 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 YARS2Q9Y2Z4 477 aaKnown RBP12.39□□□□□ -0.43
DDX41-206ENST00000506965 L3MBTL1Q9Y468 752 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 OARD1Q9Y530 152 aa12.39□□□□□ -0.43
DDX41-206ENST00000506965 HRKO00198 91 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 PSMD12O00232 456 aaPredicted RBP12.38□□□□□ -0.43
DDX41-206ENST00000506965 LDB3O75112 727 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 WDR47O94967 919 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 NADKO95544 446 aaPredicted RBP12.38□□□□□ -0.43
DDX41-206ENST00000506965 ETHE1O95571 254 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 TTC4O95801 387 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 TUBB4AP04350 444 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 RFPL3SP0C7P2 107 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 PLA2G16P53816 162 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 HSD17B7P56937 341 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 CDKL1Q00532 357 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 ID2Q02363 134 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 ABHD17CQ6PCB6 329 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 TRILQ7L0X0 811 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 SLC35F6Q8N357 371 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 DOK4Q8TEW6 326 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 ASB5Q8WWX0 329 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 ATL1Q8WXF7 558 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 SLCO2A1Q92959 643 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 SH2D2AQ9NP31 389 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 ADAP2Q9NPF8 381 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 TUBA8Q9NY65 449 aaPredicted RBP12.38□□□□□ -0.43
DDX41-206ENST00000506965 DAPP1Q9UN19 280 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 DYRK1BQ9Y463 629 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 JRKLQ9Y4A0 524 aa12.38□□□□□ -0.43
DDX41-206ENST00000506965 A0A1B0GVC2 190 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 FAM95CA0A1B0GW59 222 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 A8MVJ9 347 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 RTCAO00442 366 aaKnown RBP12.37□□□□□ -0.43
DDX41-206ENST00000506965 FANCGO15287 622 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 ZFAND5O76080 213 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 SAT1P21673 171 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 KCNC1P48547 511 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 SLC13A2Q13183 592 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 ELAVL1Q15717 326 aaKnown RBP12.37□□□□□ -0.43
DDX41-206ENST00000506965 TMEM211Q6ICI0 200 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 NIPAL1Q6NVV3 410 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 TMIGD1Q6UXZ0 262 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 ANKMY2Q8IV38 441 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms