RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 SLC28A2O43868 658 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 OTCP00480 354 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 ZNF10P21506 573 aaPredicted RBP16.73■□□□□ 0.27
SMN1-204ENST00000506163 PTX3P26022 381 aaPredicted RBP16.73■□□□□ 0.27
SMN1-204ENST00000506163 PPP2R1BP30154 601 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 SOX11P35716 441 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 OR4D2P58180 307 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 TGM3Q08188 693 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 ZNF844Q08AG5 666 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 AP5B1Q2VPB7 878 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 SGO1Q5FBB7 561 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 B3GNTL1Q67FW5 361 aaPredicted RBP16.73■□□□□ 0.27
SMN1-204ENST00000506163 PAPD4Q6PIY7 484 aaKnown RBP16.73■□□□□ 0.27
SMN1-204ENST00000506163 IGFL2Q6UWQ7 119 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 SLC22A9Q8IVM8 553 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 IQCKQ8N0W5 287 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 RIBC1Q8N443 379 aaPredicted RBP16.73■□□□□ 0.27
SMN1-204ENST00000506163 SIRT6Q8N6T7 355 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 Q8NA96 180 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 RGMAQ96B86 450 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 COPS7BQ9H9Q2 264 aaPredicted RBP16.73■□□□□ 0.27
SMN1-204ENST00000506163 LYRM4Q9HD34 91 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 C19orf25Q9UFG5 118 aaPredicted RBP16.73■□□□□ 0.27
SMN1-204ENST00000506163 ANAPC2Q9UJX6 822 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 PPT2Q9UMR5 302 aa16.73■□□□□ 0.27
SMN1-204ENST00000506163 HEMK1Q9Y5R4 338 aaPredicted RBP16.73■□□□□ 0.27
SMN1-204ENST00000506163 MYOCOSA0A1B0GUC4 107 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 TMPRSS11DO60235 418 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 PDYNP01213 254 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 MYL2P10916 166 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 CASRP41180 1078 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 SSR2P43308 183 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 SLAMF1Q13291 335 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 CUL3Q13618 768 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 CCDC153Q494R4 210 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 PLEKHN1Q494U1 663 aaPredicted RBP16.72■□□□□ 0.27
SMN1-204ENST00000506163 AGAP7PQ5VUJ5 663 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 PLAG1Q6DJT9 500 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 JMJD6Q6NYC1 403 aaPredicted RBP16.72■□□□□ 0.27
SMN1-204ENST00000506163 CLNKQ7Z7G1 428 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 SRRM1Q8IYB3 904 aaKnown RBP16.72■□□□□ 0.27
SMN1-204ENST00000506163 PPP4R1Q8TF05 950 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 AGAP4Q96P64 663 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 ZNF382Q96SR6 550 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 TRIM4Q9C037 500 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 PRM3Q9NNZ6 103 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 TNFRSF12AQ9NP84 129 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 PRTFDC1Q9NRG1 225 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 LUZP4Q9P127 313 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 TRPS1Q9UHF7 1281 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 FBXW2Q9UKT8 454 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 PLLPQ9Y342 182 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 MMACHCQ9Y4U1 282 aa16.72■□□□□ 0.27
SMN1-204ENST00000506163 A0A0A6YYD5 115 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 WASHC1A8K0Z3 465 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 A8MUA0 341 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 DPM1O60762 260 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 SPAG7O75391 227 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 CPA3P15088 417 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 NAGLUP54802 743 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 HNRNPH2P55795 449 aaKnown RBP16.71■□□□□ 0.27
SMN1-204ENST00000506163 ACTN3Q08043 901 aaPredicted RBP16.71■□□□□ 0.27
SMN1-204ENST00000506163 BTBD16Q32M84 506 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 SLC6A19Q695T7 634 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 TTC19Q6DKK2 380 aaPredicted RBP16.71■□□□□ 0.27
SMN1-204ENST00000506163 MRM1Q6IN84 353 aaKnown RBP16.71■□□□□ 0.27
SMN1-204ENST00000506163 LINC00696Q6ZRV3 163 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 RIPOR1Q6ZS17 1223 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 GPRIN3Q6ZVF9 776 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 CCNYL1Q8N7R7 359 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 CDYL2Q8N8U2 506 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 NFAM1Q8NET5 270 aaPredicted RBP16.71■□□□□ 0.27
SMN1-204ENST00000506163 UCN3Q969E3 161 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 KCNA7Q96RP8 456 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 HBEGFQ99075 208 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 NPAS2Q99743 824 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 ROGDIQ9GZN7 287 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 DDX31Q9H8H2 851 aaKnown RBP16.71■□□□□ 0.27
SMN1-204ENST00000506163 OXSMQ9NWU1 459 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 MKS1Q9NXB0 559 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 PTGFRNQ9P2B2 879 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 SLC17A7Q9P2U7 560 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 G3BP2Q9UN86 482 aaKnown RBP16.71■□□□□ 0.27
SMN1-204ENST00000506163 ATG4BQ9Y4P1 393 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 ASB4Q9Y574 426 aa16.71■□□□□ 0.27
SMN1-204ENST00000506163 PRRC2CQ9Y520 2896 aaKnown RBP16.71■□□□□ 0.26
SMN1-204ENST00000506163 MANBAO00462 879 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 MAN1A2O60476 641 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 PRKRAO75569 313 aaKnown RBP16.7■□□□□ 0.26
SMN1-204ENST00000506163 SORBS2O94875 1100 aaKnown RBP16.7■□□□□ 0.26
SMN1-204ENST00000506163 GBAP04062 536 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 ALPPP05187 535 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 CHN1P15882 459 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 RAP1GDS1P52306 607 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 HSD17B7P56937 341 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 SLC26A5P58743 744 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 DNAJB13P59910 316 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 IFT88Q13099 833 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 C18orf63Q68DL7 685 aa16.7■□□□□ 0.26
SMN1-204ENST00000506163 ISLR2Q6UXK2 745 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms