RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 IFNW1P05000 195 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 RHOP08100 348 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 ITGB8P26012 769 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 SERPINB1P30740 379 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 FEN1P39748 380 aaKnown RBP7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 MAPK9P45984 424 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 PNLIPRP1P54315 467 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 ERVFC1P60507 584 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 EEF1A2Q05639 463 aaKnown RBP7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 PDE7AQ13946 482 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 ZNF630Q2M218 657 aaPredicted RBP7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 TNFAIP8L2Q6P589 184 aaPredicted RBP7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 KLHL17Q6TDP4 642 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 TMIGD1Q6UXZ0 262 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 CEACAM20Q6UY09 585 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 NLRP8Q86W28 1048 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 KLHDC8AQ8IYD2 350 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 PARP16Q8N5Y8 322 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 ING5Q8WYH8 240 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 CDADC1Q9BWV3 514 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 ABCG4Q9H172 646 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 CCDC177Q9NQR7 707 aaPredicted RBP7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 ITM2CQ9NQX7 267 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 TAAR2Q9P1P5 351 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 IFT52Q9Y366 437 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 CFAP20Q9Y6A4 193 aaKnown RBP7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 AP1M2Q9Y6Q5 423 aa7.28□□□□□ -1.24
PPARGC1A-204ENST00000506055 C5orf58C9J3I9 102 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 ZW10O43264 779 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 MMP20O60882 483 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 FKTNO75072 461 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 MOSPD3O75425 235 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 POP7O75817 140 aaKnown RBP7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 KRT75O95678 551 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 SOD1P00441 154 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 BCHEP06276 602 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 ADRA2AP08913 450 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 ALOX12P18054 663 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 CHMP24386 653 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 PTX3P26022 381 aaPredicted RBP7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 CNR2P34972 360 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 RPL3P39023 403 aaKnown RBP7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 GPR1P46091 355 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 PXNP49023 591 aaPredicted RBP7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 MANFP55145 182 aaKnown RBP7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 DSTNP60981 165 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 E2F2Q14209 437 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 PUM1Q14671 1186 aaKnown RBP eCLIP7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 FBXO43Q4G163 708 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 ARHGAP15Q53QZ3 475 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 DEPDC1Q5TB30 811 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 ZNF697Q5TEC3 545 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 PLPP4Q5VZY2 271 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 CCDC80Q76M96 950 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 HEATR4Q86WZ0 1026 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 ZNF547Q8IVP9 402 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 METTL4Q8N3J2 472 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 KIAA1958Q8N8K9 716 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 ITPKCQ96DU7 683 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 DTD2Q96FN9 168 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 PSD2Q9BQI7 771 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 SGPP1Q9BX95 441 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 NLNQ9BYT8 704 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 CXorf36Q9H7Y0 433 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 NMNAT1Q9HAN9 279 aaPredicted RBP7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 ANKHQ9HCJ1 492 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 MYNNQ9NPC7 610 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 C11orf16Q9NQ32 467 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 PAK6Q9NQU5 681 aaPredicted RBP7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 C5AR2Q9P296 337 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 TBC1D14Q9P2M4 693 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 ANGPT4Q9Y264 503 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 ASF1AQ9Y294 204 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 TMEM98Q9Y2Y6 226 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 CAB39Q9Y376 341 aaPredicted RBP7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 ENPP4Q9Y6X5 453 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 DENND4CQ5VZ89 1909 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 TRBV4-1A0A0J9YWV2 114 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 TSPAN11A1L157 253 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 FFAR1O14842 300 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 LZTS3O60299 673 aaPredicted RBP7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 LILRB5O75023 590 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 SOX14O95416 240 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 SRPRAP08240 638 aaKnown RBP7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 IGFBP1P08833 259 aaPredicted RBP7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 PTPN2P17706 415 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 RHCEP18577 417 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 IRS1P35568 1242 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 DGKGP49619 791 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 CRISP1P54107 249 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 LIM2P55344 173 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 ST8SIA6P61647 398 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 MESP2Q0VG99 397 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 HSPB3Q12988 150 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 TSTQ16762 297 aaKnown RBP7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 ZNF658BQ4V348 819 aaPredicted RBP7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 FRMPD2BQ6IN97 320 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 REEP3Q6NUK4 255 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 HORMAD2Q8N7B1 307 aa7.27□□□□□ -1.25
PPARGC1A-204ENST00000506055 ST13P5Q8NFI4 369 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms