RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 LOC390937A0A1W2PQ73 354 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 GTPBP10A4D1E9 387 aaKnown RBP3.04□□□□□ -1.92
CHD1-203ENST00000505657 RPL37AP8A6NKH3 93 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 BCL2L11O43521 198 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 LETM1O95202 739 aaPredicted RBP3.04□□□□□ -1.92
CHD1-203ENST00000505657 LMO2P25791 158 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 OR1D2P34982 312 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 FRKP42685 505 aaPredicted RBP3.04□□□□□ -1.92
CHD1-203ENST00000505657 EIPR1Q53HC9 387 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 CCDC158Q5M9N0 1113 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 C9orf66Q5T8R8 295 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 LEMD1Q68G75 181 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 TMEM64Q6YI46 380 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 RFPL4BQ6ZWI9 263 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 CATSPER3Q86XQ3 398 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 TUSC5Q8IXB3 177 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 SPEM1Q8N4L4 309 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 NKAIN3Q8N8D7 197 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 C4orf32Q8N8J7 132 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 AFAP1L1Q8TED9 768 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 TOMM40LQ969M1 308 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 HNRNPABQ99729 332 aaKnown RBP3.04□□□□□ -1.92
CHD1-203ENST00000505657 C17orf62Q9BQA9 187 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 UBAC1Q9BSL1 405 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 CCM2Q9BSQ5 444 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 STRADBQ9C0K7 418 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 CUEDC2Q9H467 287 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 ZNF665Q9H7R5 613 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 TMEM206Q9H813 350 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 MOB1AQ9H8S9 216 aa3.04□□□□□ -1.92
CHD1-203ENST00000505657 H0Y626 953 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 SLC7A4O43246 635 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 CLN5O75503 358 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 GRAP2O75791 330 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 GLCEO94923 617 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 FGF19O95750 216 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 SEMA4FO95754 770 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 RENP00797 406 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 GH1P01241 217 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 IGHG3P01860 377 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 MELTFP08582 738 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 ODC1P11926 461 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 PTGER3P43115 390 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 ZFP36L2P47974 494 aaKnown RBP3.03□□□□□ -1.92
CHD1-203ENST00000505657 CSRP3P50461 194 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 RPS27AP62979 156 aaKnown RBP3.03□□□□□ -1.92
CHD1-203ENST00000505657 ACY1Q03154 408 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 RBBP4Q09028 425 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 NFE2L1Q14494 772 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 POM121L1PQ3SYA9 428 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 ANKRD20A4Q4UJ75 823 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 ANKRD20A8PQ5CZ79 823 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 ANKRD20A2Q5SQ80 823 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 ANKRD20A1Q5TYW2 823 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 ANKRD20A3Q5VUR7 823 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 AGAP6Q5VW22 663 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 LYPLAL1Q5VWZ2 237 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 CEACAM19Q7Z692 300 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 NLRP14Q86W24 1093 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 CACUL1Q86Y37 369 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 KLHDC8AQ8IYD2 350 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 LINC00612Q8N6U2 182 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 RNF149Q8NC42 400 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 ZNRF1Q8ND25 227 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 OR7G3Q8NG95 312 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 SNRNP40Q96DI7 357 aaKnown RBP3.03□□□□□ -1.92
CHD1-203ENST00000505657 C1orf147Q96MC9 270 aaPredicted RBP3.03□□□□□ -1.92
CHD1-203ENST00000505657 ALKBH3Q96Q83 286 aaPredicted RBP3.03□□□□□ -1.92
CHD1-203ENST00000505657 ERGIC2Q96RQ1 377 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 UTP14AQ9BVJ6 771 aaKnown RBP3.03□□□□□ -1.92
CHD1-203ENST00000505657 IDI2Q9BXS1 227 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 LIME1Q9H400 295 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 FAM212BQ9NTI7 297 aaPredicted RBP3.03□□□□□ -1.92
CHD1-203ENST00000505657 DEPPQ9NTK1 212 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 PSORS1C1Q9UIG5 152 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 TSPAN16Q9UKR8 245 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 RARRES3Q9UL19 164 aa3.03□□□□□ -1.92
CHD1-203ENST00000505657 MAGEB16A2A368 324 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 SDR42E2A6NKP2 422 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 ZNF724A8MTY0 619 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 M0R296 226 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 FBP2O00757 339 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 OGTO15294 1046 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 TXNL1O43396 289 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 ZNF354AO60765 605 aaPredicted RBP3.02□□□□□ -1.93
CHD1-203ENST00000505657 ATP9AO75110 1047 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 VENTXO95231 258 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 IGHG1P01857 330 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 HCKP08631 526 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 SKILP12757 684 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 SLC3A1Q07837 685 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 CCL14Q16627 93 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 ECSCRQ19T08 205 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 TYSND1Q2T9J0 566 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 HIGD2BQ4VC39 106 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 RFTN2Q52LD8 501 aaPredicted RBP3.02□□□□□ -1.93
CHD1-203ENST00000505657 SLC25A30Q5SVS4 291 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 FAM182AQ5T1J6 154 aa3.02□□□□□ -1.93
CHD1-203ENST00000505657 ASPGQ86U10 573 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms