RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813	ANKH	Q9HCJ1	492 aa		13.9	□□□□□ -0.18
CNBP-208	ENST00000504813	MID1IP1	Q9NPA3	183 aa		13.9	□□□□□ -0.18
CNBP-208	ENST00000504813	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.9	□□□□□ -0.18
CNBP-208	ENST00000504813	SLAMF7	Q9NQ25	335 aa		13.9	□□□□□ -0.18
CNBP-208	ENST00000504813	PTBP2	Q9UKA9	531 aa	Known RBP	13.9	□□□□□ -0.18
CNBP-208	ENST00000504813	PCTP	Q9UKL6	214 aa		13.9	□□□□□ -0.18
CNBP-208	ENST00000504813	MKL2	Q9ULH7	1088 aa		13.9	□□□□□ -0.18
CNBP-208	ENST00000504813	B3GNT3	Q9Y2A9	372 aa		13.9	□□□□□ -0.18
CNBP-208	ENST00000504813	TRAF6	Q9Y4K3	522 aa		13.9	□□□□□ -0.18
CNBP-208	ENST00000504813	COL12A1	Q99715	3063 aa		13.9	□□□□□ -0.18
CNBP-208	ENST00000504813	NSG1	A0A0A6YYJ2	146 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	LRRC14B	A6NHZ5	514 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	NDUFS4	O43181	175 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	TSPAN8	P19075	237 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	CXCR2	P25025	360 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	SERPINB3	P29508	390 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	AHR	P35869	848 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	GDF5	P43026	501 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	PIK3CG	P48736	1102 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	AGTR2	P50052	363 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	IDH3A	P50213	366 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	HNRNPH2	P55795	449 aa	Known RBP	13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	REEP5	Q00765	189 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	EEF1A2	Q05639	463 aa	Known RBP	13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	INPP5J	Q15735	1006 aa	Predicted RBP	13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	PRR30	Q53SZ7	412 aa	Predicted RBP	13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	AGAP7P	Q5VUJ5	663 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	EPGN	Q6UW88	154 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	NXPE4	Q6UWF7	544 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813		Q6ZS92	163 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	RPS27L	Q71UM5	84 aa	Known RBP	13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	TMPRSS11B	Q86T26	416 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	CLYBL	Q8N0X4	340 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	ZADH2	Q8N4Q0	377 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	FITM2	Q8N6M3	262 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	ANKRD53	Q8N9V6	530 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	NT5C	Q8TCD5	201 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	UBTD2	Q8WUN7	234 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	CCT6B	Q92526	530 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	TM9SF4	Q92544	642 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	ATP6V1E2	Q96A05	226 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	AGAP4	Q96P64	663 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	CD244	Q9BZW8	370 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	VN1R1	Q9GZP7	353 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	HCN3	Q9P1Z3	774 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	OPTC	Q9UBM4	332 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	FIS1	Q9Y3D6	152 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	NAALAD2	Q9Y3Q0	740 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	DYRK1B	Q9Y463	629 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	CSAG2	Q9Y5P2	127 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	KCNE2	Q9Y6J6	123 aa		13.9	□□□□□ -0.19
CNBP-208	ENST00000504813	FLNC	Q14315	2725 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	CLEC18A	A5D8T8	446 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	TAPBP	O15533	448 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	CCNT2	O60583	730 aa	Known RBP	13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	RDH16	O75452	317 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	STK16	O75716	305 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	KLHL18	O94889	574 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	ARL1	P40616	181 aa	Predicted RBP	13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	XCR1	P46094	333 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	HSPA7	P48741	367 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	PKNOX1	P55347	436 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	GTF2H2	Q13888	395 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	HERC3	Q15034	1050 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	PCOLCE	Q15113	449 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	PDCD2	Q16342	344 aa	Predicted RBP	13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	FBXO48	Q5FWF7	155 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	IRAK1BP1	Q5VVH5	260 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	GTF2H2C	Q6P1K8	395 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	CLEC18B	Q6UXF7	455 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	ATCAY	Q86WG3	371 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	HOMEZ	Q8IX15	550 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	TBC1D19	Q8N5T2	526 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	EFCAB3	Q8N7B9	438 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	CLEC18C	Q8NCF0	446 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	PSMF1	Q92530	271 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	ERP27	Q96DN0	273 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	NSUN5	Q96P11	429 aa	Known RBP	13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	AIF1L	Q9BQI0	150 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	TMEM79	Q9BSE2	394 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	ZNF700	Q9H0M5	742 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	PFDN4	Q9NQP4	134 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813	TRIM33	Q9UPN9	1127 aa		13.89	□□□□□ -0.19
CNBP-208	ENST00000504813		K7EPI3	171 aa		13.88	□□□□□ -0.19
CNBP-208	ENST00000504813	E2F3	O00716	465 aa		13.88	□□□□□ -0.19
CNBP-208	ENST00000504813	UBFD1	O14562	309 aa	Known RBP	13.88	□□□□□ -0.19
CNBP-208	ENST00000504813	ZNF195	O14628	629 aa		13.88	□□□□□ -0.19
CNBP-208	ENST00000504813	AZIN1	O14977	448 aa		13.88	□□□□□ -0.19
CNBP-208	ENST00000504813	WDR47	O94967	919 aa		13.88	□□□□□ -0.19
CNBP-208	ENST00000504813	ESRRB	O95718	433 aa		13.88	□□□□□ -0.19
CNBP-208	ENST00000504813	CHEK2	O96017	543 aa		13.88	□□□□□ -0.19
CNBP-208	ENST00000504813	CYC1	P08574	325 aa		13.88	□□□□□ -0.19
CNBP-208	ENST00000504813	FGF4	P08620	206 aa		13.88	□□□□□ -0.19
CNBP-208	ENST00000504813	PRR35	P0CG20	571 aa		13.88	□□□□□ -0.19
CNBP-208	ENST00000504813	C8orf89	P0DMQ9	161 aa		13.88	□□□□□ -0.19
CNBP-208	ENST00000504813	GGT5	P36269	586 aa		13.88	□□□□□ -0.19
CNBP-208	ENST00000504813	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.88	□□□□□ -0.19	5e-8	■□□□□ 8.8
CNBP-208	ENST00000504813	HYAL2	Q12891	473 aa		13.88	□□□□□ -0.19
CNBP-208	ENST00000504813	CRB2	Q5IJ48	1285 aa		13.88	□□□□□ -0.19
CNBP-208	ENST00000504813	GPRIN3	Q6ZVF9	776 aa		13.88	□□□□□ -0.19

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