RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 ID2Q02363 134 aa21.12■□□□□ 0.97
CDC42SE2-207ENST00000504701 CDSNQ15517 529 aa21.12■□□□□ 0.97
CDC42SE2-207ENST00000504701 ZNF572Q7Z3I7 529 aaPredicted RBP21.12■□□□□ 0.97
CDC42SE2-207ENST00000504701 ZNF473Q8WTR7 871 aaKnown RBP21.12■□□□□ 0.97
CDC42SE2-207ENST00000504701 SERINC2Q96SA4 455 aa21.12■□□□□ 0.97
CDC42SE2-207ENST00000504701 MAPKAP1Q9BPZ7 522 aa21.12■□□□□ 0.97
CDC42SE2-207ENST00000504701 MS4A8Q9BY19 250 aa21.12■□□□□ 0.97
CDC42SE2-207ENST00000504701 PHACTR1Q9C0D0 580 aa21.12■□□□□ 0.97
CDC42SE2-207ENST00000504701 ZDHHC18Q9NUE0 388 aa21.12■□□□□ 0.97
CDC42SE2-207ENST00000504701 NUDT4Q9NZJ9 180 aa21.12■□□□□ 0.97
CDC42SE2-207ENST00000504701 KCMF1Q9P0J7 381 aa21.12■□□□□ 0.97
CDC42SE2-207ENST00000504701 NCOA6Q14686 2063 aaPredicted RBP21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 TMEM200CA6NKL6 621 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 TGFB1P01137 390 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 S100BP04271 92 aaPredicted RBP21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 PCNAP12004 261 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 MTHFD2P13995 350 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 STX2P32856 288 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 TRHRP34981 398 aaPredicted RBP21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 HLCSP50747 726 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 CLCN2P51788 898 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 HSD17B7P56937 341 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 CAV1Q03135 178 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 MROH9Q5TGP6 573 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 SP5Q6BEB4 398 aaPredicted RBP21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 LRRC70Q7Z2Q7 622 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 MDGA2Q7Z553 956 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 FGD2Q7Z6J4 655 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 ARMC10Q8N2F6 343 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 LRRC1Q9BTT6 524 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 EFCAB11Q9BUY7 163 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 PITHD1Q9GZP4 211 aaPredicted RBP21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 TRIM45Q9H8W5 580 aaPredicted RBP21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 COPS7BQ9H9Q2 264 aaPredicted RBP21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 ZNF835Q9Y2P0 537 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 GTF3C1Q12789 2109 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 PCNX1Q96RV3 2341 aa21.11■□□□□ 0.97
CDC42SE2-207ENST00000504701 EML6Q6ZMW3 1958 aa21.1■□□□□ 0.97
CDC42SE2-207ENST00000504701 KERAO60938 352 aa21.1■□□□□ 0.97
CDC42SE2-207ENST00000504701 LDB3O75112 727 aa21.1■□□□□ 0.97
CDC42SE2-207ENST00000504701 ITGA10O75578 1167 aa21.1■□□□□ 0.97
CDC42SE2-207ENST00000504701 LTA4HP09960 611 aaKnown RBP21.1■□□□□ 0.97
CDC42SE2-207ENST00000504701 GSTM2P28161 218 aa21.1■□□□□ 0.97
CDC42SE2-207ENST00000504701 MEOX1P50221 254 aa21.1■□□□□ 0.97
CDC42SE2-207ENST00000504701 GPR85P60893 370 aa21.1■□□□□ 0.97
CDC42SE2-207ENST00000504701 ILF2Q12905 390 aaKnown RBP21.1■□□□□ 0.97
CDC42SE2-207ENST00000504701 E2F2Q14209 437 aa21.1■□□□□ 0.97
CDC42SE2-207ENST00000504701 MRGPRGQ86SM5 289 aa21.1■□□□□ 0.97
CDC42SE2-207ENST00000504701 TBC1D1Q86TI0 1168 aaPredicted RBP21.1■□□□□ 0.97
CDC42SE2-207ENST00000504701 STAG3L4Q8TBR4 150 aa21.1■□□□□ 0.97
CDC42SE2-207ENST00000504701 UBTD2Q8WUN7 234 aa21.1■□□□□ 0.97
CDC42SE2-207ENST00000504701 ASNA1O43681 348 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 ATP5A1P25705 553 aaKnown RBP21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 PTGER1P34995 402 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 RBPJQ06330 500 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 C3P1Q6ZMU1 363 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 SPPL2CQ8IUH8 684 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 SULF2Q8IWU5 870 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 ZNF595Q8IYB9 648 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 HORMAD2Q8N7B1 307 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 PTPMT1Q8WUK0 201 aaPredicted RBP21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 MARVELD3Q96A59 401 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 VMP1Q96GC9 406 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 SEC16BQ96JE7 1060 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 MAGED4Q96JG8 741 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 OR51B5Q9H339 312 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 NMRAL1Q9HBL8 299 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 ADAP2Q9NPF8 381 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 PPIEQ9UNP9 301 aaKnown RBP21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 CSMD1Q96PZ7 3565 aa21.09■□□□□ 0.97
CDC42SE2-207ENST00000504701 K7EPI3 171 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 CLDN4O14493 209 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 FCHO1O14526 889 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 PRKRAO75569 313 aaKnown RBP21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 IFNA16P05015 189 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 C2P06681 752 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 ZNF24P17028 368 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 CRABP2P29373 138 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 CASP2P42575 452 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 DDX39BQ13838 428 aaKnown RBP21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 TERF2Q15554 542 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 TBCCQ15814 346 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 UAP1Q16222 522 aaPredicted RBP21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 LAS2Q8IYD9 372 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 CYP4Z2PQ8N1L4 340 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 TEX9Q8N6V9 391 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 ACOT4Q8N9L9 421 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 OR7G3Q8NG95 312 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 ADAMTS18Q8TE60 1221 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 DOK4Q8TEW6 326 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 ALOXE3Q9BYJ1 711 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 PRM3Q9NNZ6 103 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 SNX15Q9NRS6 342 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 OPTCQ9UBM4 332 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 SUCOQ9UBS9 1254 aaKnown RBP21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 ENTPD4Q9Y227 616 aa21.08■□□□□ 0.97
CDC42SE2-207ENST00000504701 A0A088AWK7 358 aa21.07■□□□□ 0.96
CDC42SE2-207ENST00000504701 A0A0G2JMM0 328 aa21.07■□□□□ 0.96
CDC42SE2-207ENST00000504701 A0A1W2PPB8 328 aa21.07■□□□□ 0.96
CDC42SE2-207ENST00000504701 A0A1W2PRS3 328 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms