RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 ZNF433Q8N7K0 673 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PIGKQ92643 395 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SLCO4A1Q96BD0 722 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PIWIL1Q96J94 861 aaKnown RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 RTKNQ9BST9 563 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 IL22Q9GZX6 179 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PPA2Q9H2U2 334 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SOX17Q9H6I2 414 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 HMX1Q9NP08 348 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 EQTNQ9NQ60 294 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TLR8Q9NR97 1041 aaKnown RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CATSPERZQ9NTU4 200 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SH3BGRL2Q9UJC5 107 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 C19orf53Q9UNZ5 99 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 NUBP2Q9Y5Y2 271 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ARID2Q68CP9 1835 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 NLRC5Q86WI3 1866 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 A0A1W2PP18 115 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SOWAHBA6NEL2 793 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 C5orf52A6NGY3 159 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 MPTX1A8MV57 137 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 H3BSH0 61 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 RFXANKO14593 260 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 CHADO15335 359 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 FFAR2O15552 330 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 PQBP1O60828 265 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 AP2A2O94973 939 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 DIRAS1O95057 198 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 NSA2O95478 260 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 IL18BPO95998 194 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 HRGP04196 525 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 ITGAVP06756 1048 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 CSH1P0DML2 217 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 CSH2P0DML3 217 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 ADORA3P0DMS8 318 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SNHG28P0DPA3 235 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 BMP1P13497 986 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 XRCC1P18887 633 aaPredicted RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 PCMT1P22061 227 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 G0S2P27469 103 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 BUD31P41223 144 aaPredicted RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 PTGIRP43119 386 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 GABRB2P47870 512 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SPIBQ01892 262 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 BNIP2Q12982 314 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 CHAF1BQ13112 559 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 GANABQ14697 944 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 QPRTQ15274 297 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 TSNQ15631 228 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 HSDL1Q3SXM5 330 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC9B1Q4ZJI4 515 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 PLA1AQ53H76 456 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 LIPMQ5VYY2 423 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 HMBOX1Q6NT76 420 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM131AQ6UXB0 335 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM151BQ6UXP7 276 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 MTSS1LQ765P7 747 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 MON1BQ7L1V2 547 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 OVCH2Q7RTZ1 564 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 THOC6Q86W42 341 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 PLD5Q8N7P1 536 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 OR2T12Q8NG77 320 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 OR9I1Q8NGQ6 314 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 RNASE8Q8TDE3 154 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 XAGE5Q8WWM1 108 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 RIT1Q92963 219 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 TRIM63Q969Q1 353 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SHISA4Q96DD7 197 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 UBXN10Q96LJ8 280 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 KCNS3Q9BQ31 491 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 WDR77Q9BQA1 342 aaPredicted RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 DPH7Q9BTV6 452 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 C20orf27Q9GZN8 174 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 POLR1EQ9GZS1 481 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SPNS1Q9H2V7 528 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 ELL3Q9HB65 397 aaPredicted RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 MYOZ1Q9NP98 299 aaPredicted RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 HPF1Q9NWY4 346 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 KLHL28Q9NXS3 571 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 DHCR7Q9UBM7 475 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 NDOR1Q9UHB4 597 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 LEF1Q9UJU2 399 aaPredicted RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 TNFSF13BQ9Y275 285 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 POLR1DQ9Y2S0 133 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 INSL6Q9Y581 213 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 PCDHB7Q9Y5E2 793 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 PCDHA11Q9Y5I1 949 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 ACTL7BQ9Y614 415 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 NINQ8N4C6 2090 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 CXorf49A8MYA2 514 aaPredicted RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 H7C0S8 307 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 EI24O14681 340 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 CASKO14936 926 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SMAD9O15198 467 aaKnown RBP3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 RGS14O43566 566 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 UGT2B11O75310 529 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 CABYRO75952 493 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 NXPH2O95156 264 aa3.53□□□□□ -1.84
PCDH11X-208ENST00000504220 SIX3O95343 332 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms