RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ADGRF1Q5T601 910 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 PSAPL1Q6NUJ1 521 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 PSD4Q8NDX1 1056 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 ATP6V1C2Q8NEY4 427 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 ATOH8Q96SQ7 321 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 RC3H2Q9HBD1 1191 aaKnown RBP16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 COPZ2Q9P299 210 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 CKLFQ9UBR5 152 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 ADAMTS5Q9UNA0 930 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 SIPA1L3O60292 1781 aaPredicted RBP16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 SLC38A8A6NNN8 435 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 EEF1E1O43324 174 aaKnown RBP16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 KLK1P06870 262 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 HK1P19367 917 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 LBX1P52954 281 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 MED30Q96HR3 178 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 CCDC115Q96NT0 180 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 ARNT2Q9HBZ2 717 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 A0A1W2PQ09 198 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 PCDH17O14917 1159 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 SLC16A6O15403 523 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 ADAP00813 363 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 HSD3B1P14060 373 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 HSD3B2P26439 372 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 ARCN1P48444 511 aaKnown RBP16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 ST3GAL3Q11203 375 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 ADPRMQ3LIE5 342 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 TMEM220Q6QAJ8 160 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 NRARPQ7Z6K4 114 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 UBE2Q1Q7Z7E8 422 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 SERPINA11Q86U17 422 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 OR4K1Q8NGD4 311 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 C2orf15Q8WU43 125 aaKnown RBP16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 SLCO4A1Q96BD0 722 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 C14orf105Q9NVL8 296 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 CLDND1Q9NY35 253 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 TNFRSF10AO00220 468 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 PIM1P11309 404 aaPredicted RBP16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 MICAQ29983 383 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 PRPF38BQ5VTL8 546 aaKnown RBP16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 NXPE1Q8N323 547 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 C2orf73Q8N5S3 287 aaPredicted RBP16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 FAM110BQ8TC76 370 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 ASB4Q9Y574 426 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 ANXA2P2A6NMY6 339 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 CLDN7O95471 211 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 RB1P06400 928 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 ANXA2P07355 339 aaKnown RBP16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 MSL3P1P0C860 447 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 HOXD8P13378 290 aaPredicted RBP16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 PRDX3P30048 256 aaKnown RBP16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 CNR2P34972 360 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 C4orf46Q504U0 113 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 GALNT10Q86SR1 603 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 ZSCAN32Q9NX65 697 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 GNB5O14775 395 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 H2AFB2P0C5Z0 115 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 SYN1P17600 705 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 C21orf33P30042 268 aaPredicted RBP16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 TAS2R50P59544 299 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 SLC3A1Q07837 685 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 CCL14Q16627 93 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 EIPR1Q53HC9 387 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 SLC27A4Q6P1M0 643 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 AGTRAPQ6RW13 159 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 COMMD2Q86X83 199 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 Q8N9G6 341 aaPredicted RBP16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 NPLOC4Q8TAT6 608 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 OSTF1Q92882 214 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 FERD3LQ96RJ6 166 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 CNOT2Q9NZN8 540 aaKnown RBP16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 ATP1B2P14415 290 aaPredicted RBP16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 FGFBP1Q14512 234 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 PKDCCQ504Y2 493 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 RNF111Q6ZNA4 994 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 TMEM130Q8N3G9 435 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 OLIG1Q8TAK6 271 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 OR8D1Q8WZ84 308 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 FBXO8Q9NRD0 319 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 ATPIF1Q9UII2 106 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 CDH10Q9Y6N8 788 aa16.55■□□□□ 0.24
HMGXB3-201ENST00000502717 CTDSP2O14595 271 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 SMCO1Q147U7 214 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 FBXO46Q6PJ61 603 aaPredicted RBP16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 IQCHQ86VS3 1027 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 DBF4BQ8NFT6 615 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 ING5Q8WYH8 240 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 PCBD2Q9H0N5 130 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 BMP1P13497 986 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 RBM34P42696 430 aaKnown RBP16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 RPS13P62277 151 aaKnown RBP16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 CDK10Q15131 360 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 CYP27C1Q4G0S4 372 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 NUDT13Q86X67 352 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 OR5H6Q8NGV6 325 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 BEX1Q9HBH7 125 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 CFAP97Q9P2B7 532 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 ZFR2Q9UPR6 939 aaKnown RBP16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 AP1M2Q9Y6Q5 423 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 ADAMTS7Q9UKP4 1686 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms