RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 ATP5A1P25705 553 aaKnown RBP17.32■□□□□ 0.36
LINC00535-201ENST00000501400 CD27P26842 260 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 CERS1P27544 350 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 SOAT1P35610 550 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 LSSP48449 732 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 ARFIP1P53367 373 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 NDUFAF5Q5TEU4 345 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 FCRL6Q6DN72 434 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 ANGPTL8Q6UXH0 198 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 DGLUCYQ7Z3D6 616 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 CARM1Q86X55 608 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 ADHFE1Q8IWW8 467 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 ACOT4Q8N9L9 421 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 EXOSC8Q96B26 276 aaKnown RBP17.32■□□□□ 0.36
LINC00535-201ENST00000501400 SHDQ96IW2 340 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 PRDM6Q9NQX0 595 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 SIRT3Q9NTG7 399 aaPredicted RBP17.32■□□□□ 0.36
LINC00535-201ENST00000501400 DLGAP2Q9P1A6 1054 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 ASB4Q9Y574 426 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 CEP192Q8TEP8 1941 aa17.32■□□□□ 0.36
LINC00535-201ENST00000501400 MAP3K13O43283 966 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 SMNDC1O75940 238 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC00535-201ENST00000501400 ZNF682O95780 498 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 CRATP43155 626 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 IST1P53990 364 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 RAB8AP61006 207 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 TXNL4AP83876 142 aaKnown RBP17.31■□□□□ 0.36
LINC00535-201ENST00000501400 GPR153Q6NV75 609 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 FBXO42Q6P3S6 717 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 RNF130Q86XS8 419 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 ZCCHC7Q8N3Z6 543 aaKnown RBP17.31■□□□□ 0.36
LINC00535-201ENST00000501400 KCT2Q8NC54 265 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 FAM174AQ8TBP5 190 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 OR5P2Q8WZ92 322 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 TBC1D17Q9HA65 648 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 C8orf4Q9NR00 106 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 C1GALT1Q9NS00 363 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 TAS2R7Q9NYW3 318 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 DNAJB9Q9UBS3 223 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 FAF1Q9UNN5 650 aaPredicted RBP17.31■□□□□ 0.36
LINC00535-201ENST00000501400 PCDHGA2Q9Y5H1 932 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 RNF103-CHMP3A0A140T963 221 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 FAM221BA6H8Z2 402 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 OR5K4A6NMS3 321 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 WASHC1A8K0Z3 465 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 TMEM229AB2RXF0 380 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 PLOD2O00469 737 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 P2RX6O15547 441 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 CST1P01037 141 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 CTSEP14091 401 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 JUNDP17535 347 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 CHN2P52757 468 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 EEF1A2Q05639 463 aaKnown RBP17.31■□□□□ 0.36
LINC00535-201ENST00000501400 FADDQ13158 208 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 SLAMF1Q13291 335 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 PUS10Q3MIT2 529 aaKnown RBP17.31■□□□□ 0.36
LINC00535-201ENST00000501400 TRIM40Q6P9F5 258 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 CBLL1Q75N03 491 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 ZNF761Q86XN6 746 aaPredicted RBP17.31■□□□□ 0.36
LINC00535-201ENST00000501400 C11orf65Q8NCR3 313 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 POP5Q969H6 163 aaKnown RBP17.31■□□□□ 0.36
LINC00535-201ENST00000501400 OR2A5Q96R48 311 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 EHD3Q9NZN3 535 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 SCOCQ9UIL1 159 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 PILRAQ9UKJ1 303 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 ATG4BQ9Y4P1 393 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 KLK4Q9Y5K2 254 aa17.31■□□□□ 0.36
LINC00535-201ENST00000501400 MAGED1Q9Y5V3 778 aaPredicted RBP17.31■□□□□ 0.36
LINC00535-201ENST00000501400 ABCA7Q8IZY2 2146 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 A0A1W2PR48 441 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 B4GALT2O60909 372 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 NDUFS2O75306 463 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 DRD2P14416 443 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 UQCRC2P22695 453 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 MAOBP27338 520 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 CHI3L1P36222 383 aaPredicted RBP17.3■□□□□ 0.36
LINC00535-201ENST00000501400 CDK9P50750 372 aaKnown RBP17.3■□□□□ 0.36
LINC00535-201ENST00000501400 BLKP51451 505 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 SLC9A5Q14940 896 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 GCNT6Q5T4J0 391 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 SAXO2Q658L1 398 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 SPESP1Q6UW49 350 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 EIF3MQ7L2H7 374 aaKnown RBP17.3■□□□□ 0.36
LINC00535-201ENST00000501400 VTCN1Q7Z7D3 282 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 ASPGQ86U10 573 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 SPEM1Q8N4L4 309 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 NATD1Q8N6N6 113 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 NT5CQ8TCD5 201 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 TFAP2CQ92754 450 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 TM4SF19Q96DZ7 209 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 NELL2Q99435 816 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 KLHL25Q9H0H3 589 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 NEUROD4Q9HD90 331 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 MAP4K5Q9Y4K4 846 aa17.3■□□□□ 0.36
LINC00535-201ENST00000501400 TP53BP1Q12888 1972 aaPredicted RBP17.3■□□□□ 0.36
LINC00535-201ENST00000501400 A6NHS1 94 aa17.29■□□□□ 0.36
LINC00535-201ENST00000501400 PRAMEF10O60809 474 aa17.29■□□□□ 0.36
LINC00535-201ENST00000501400 PVRP15151 417 aa17.29■□□□□ 0.36
LINC00535-201ENST00000501400 AQP1P29972 269 aa17.29■□□□□ 0.36
LINC00535-201ENST00000501400 TSFMP43897 325 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms