RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 FAM129CQ86XR2 697 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 ETFBKMTQ8IXQ9 262 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 ADGRF3Q8IZF5 1079 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 PLA2G15Q8NCC3 412 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 ST13P5Q8NFI4 369 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 SPPL3Q8TCT6 385 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 UTP15Q8TED0 518 aaKnown RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 S100ZQ8WXG8 99 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 SLC38A4Q969I6 547 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 MTERF3Q96E29 417 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 ZNF717Q9BY31 904 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 EPS8L2Q9H6S3 715 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 SLAMF7Q9NQ25 335 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 MIEF1Q9NQG6 463 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 ACER3Q9NUN7 267 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 RAB23Q9ULC3 237 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 HEATR5BQ9P2D3 2071 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 C17orf113A0A1B0GUU1 675 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 TMEM247A6NEH6 219 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 ANTXRLA6NF34 631 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 RTCAO00442 366 aaKnown RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 PI15O43692 258 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 ITGA2P17301 1181 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 GRK3P35626 688 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 CD97P48960 835 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 CYP4F2P78329 520 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 RELAQ04206 551 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 DPTQ07507 201 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 TRIM16LQ309B1 348 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 HNRNPA1L2Q32P51 320 aaKnown RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 RPS26P11Q5JNZ5 115 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 MLIPQ5VWP3 458 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 IKBIPQ70UQ0 350 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 SLC9B2Q86UD5 537 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 PLD3Q8IV08 490 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 CELF5Q8N6W0 485 aaKnown RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 TMIEQ8NEW7 156 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 OR8D1Q8WZ84 308 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 FCGR1BQ92637 280 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 GTPBP3Q969Y2 492 aaKnown RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 ZNF707Q96C28 371 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 ZHX1-C8orf76Q96EF9 292 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 FAM129BQ96TA1 746 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 PIP5K1AQ99755 562 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 MROQ9BYG7 248 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 ABCG4Q9H172 646 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 IL23AQ9NPF7 189 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 ZDHHC4Q9NPG8 344 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 RHCGQ9UBD6 479 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 ANGPT4Q9Y264 503 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 MRPS23Q9Y3D9 190 aaKnown RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 SNX8Q9Y5X2 465 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 COL4A3Q01955 1670 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 TRBC2A0A5B9 178 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 FAM227AF5H4B4 570 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 KRT75O95678 551 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 ADH1CP00326 375 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 STSP08842 583 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 GADD45AP24522 165 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 PTX3P26022 381 aaPredicted RBP9.4□□□□□ -0.9
CLIP1-204ENST00000501271 GRK5P34947 590 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 BMPR1AP36894 532 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 DSTNP60981 165 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 CAMK1Q14012 370 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 DUSP7Q16829 419 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 TIGD6Q17RP2 521 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 GAB4Q2WGN9 574 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 LCTLQ6UWM7 567 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 UNC5DQ6UXZ4 953 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 PDZD3Q86UT5 571 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 NLGN4XQ8N0W4 816 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 SETD7Q8WTS6 366 aaKnown RBP9.4□□□□□ -0.9
CLIP1-204ENST00000501271 MYDGFQ969H8 173 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 UBE2E3Q969T4 207 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 ZNF514Q96K75 400 aaPredicted RBP9.4□□□□□ -0.9
CLIP1-204ENST00000501271 RSPO3Q9BXY4 272 aaPredicted RBP9.4□□□□□ -0.9
CLIP1-204ENST00000501271 DCSTAMPQ9H295 470 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 C11orf49Q9H6J7 331 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 CUEDC1Q9NWM3 386 aaPredicted RBP9.4□□□□□ -0.9
CLIP1-204ENST00000501271 TRNAU1APQ9NX07 287 aaKnown RBP9.4□□□□□ -0.9
CLIP1-204ENST00000501271 SLC23A2Q9UGH3 650 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 TAC3Q9UHF0 121 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 GPR34Q9UPC5 381 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 TSC22D4Q9Y3Q8 395 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 CFAP20Q9Y6A4 193 aaKnown RBP9.4□□□□□ -0.9
CLIP1-204ENST00000501271 ENPP4Q9Y6X5 453 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 TRPM6Q9BX84 2022 aa9.4□□□□□ -0.9
CLIP1-204ENST00000501271 REV3LO60673 3130 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 EDDM13A0A1B0GTR0 161 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 A8MVJ9 347 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 KPNA4O00629 521 aaPredicted RBP9.4□□□□□ -0.91
CLIP1-204ENST00000501271 AIREO43918 545 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 GADD45GO95257 159 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 PTHP01270 115 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 HNRNPA1P09651 372 aaKnown RBP eCLIP9.4□□□□□ -0.91
CLIP1-204ENST00000501271 ADORA3P0DMS8 318 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 PORP16435 677 aaPredicted RBP9.4□□□□□ -0.91
CLIP1-204ENST00000501271 CDH3P22223 829 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 CBLP22681 906 aa9.4□□□□□ -0.91
CLIP1-204ENST00000501271 UQCRC2P22695 453 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms