RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 ZNF626Q68DY1 528 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ERN2Q76MJ5 926 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 TSEN54Q7Z6J9 526 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 NRARPQ7Z6K4 114 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CSNK2A3Q8NEV1 391 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 OR13G1Q8NGZ3 307 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ZNF564Q8TBZ8 553 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 CDS1Q92903 461 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PINX1Q96BK5 328 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 MYOCQ99972 504 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SOSTQ9BQB4 213 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TRIM56Q9BRZ2 755 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 ADAT1Q9BUB4 502 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 RSRP1Q9BUV0 290 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TRIM62Q9BVG3 475 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CARD6Q9BX69 1037 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TDRD1Q9BXT4 1180 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 UBA5Q9GZZ9 404 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 OR51E2Q9H255 320 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CCDC86Q9H6F5 360 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 MOB1AQ9H8S9 216 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 C17orf75Q9HAS0 396 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PDFQ9HBH1 243 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TCF7L1Q9HCS4 588 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ARFGAP3Q9NP61 516 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 UFSP2Q9NUQ7 469 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 FAM105AQ9NUU6 356 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 RNF14Q9UBS8 474 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ZNF222Q9UK12 451 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.36□□□□□ -2.19
XRN1-214ENST00000498077 POLR3AO14802 1390 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 A0A087WV48 116 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ANKUB1A6NFN9 424 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 C21orf140B9A014 251 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GOLGA8SH3BPF8 625 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SYT5O00445 386 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 WNT9BO14905 357 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 AQP9O43315 295 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 LCMT2O60294 686 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 CSDE1O75534 798 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 SLITRK3O94933 977 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ADCY5O95622 1261 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CLIC3O95833 236 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 FADS2O95864 444 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 ICAM1P05362 532 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 FRMD6-AS1P0C7T7 363 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PCNAP12004 261 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MLNP12872 115 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 HNRNPLP14866 589 aaKnown RBP eCLIP1.36□□□□□ -2.19
XRN1-214ENST00000498077 ALOX5APP20292 161 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 UGT2B15P54855 530 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ITGA1P56199 1179 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ERVFRD-1P60508 538 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 RPL24P83731 157 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 ELOBQ15370 118 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SNAI3Q3KNW1 292 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 HIST2H3PS2Q5TEC6 136 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PCNX4Q63HM2 1172 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 NIPAL1Q6NVV3 410 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 LETMD1Q6P1Q0 360 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SLC30A9Q6PML9 568 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ESPNLQ6ZVH7 1005 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MOB3CQ70IA8 216 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 OR2W3Q7Z3T1 314 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GRASPQ7Z6J2 395 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 HOGA1Q86XE5 327 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ABHD12Q8N2K0 398 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TTC9BQ8N6N2 239 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PRELID2Q8N945 189 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ASCC1Q8N9N2 400 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 TMIEQ8NEW7 156 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 OR4D6Q8NGJ1 314 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SLC35B2Q8TB61 432 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 LRRC20Q8TCA0 184 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 NUDCD2Q8WVJ2 157 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 KAT2AQ92830 837 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 RPUSD4Q96CM3 377 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 MSI2Q96DH6 328 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 RSPRY1Q96DX4 576 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 FAM89AQ96GI7 184 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 KREMEN1Q96MU8 473 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ZNF300Q96RE9 604 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 UCN2Q96RP3 112 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GPR22Q99680 433 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 THUMPD2Q9BTF0 503 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 SAP30LQ9HAJ7 183 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PARD6AQ9NPB6 346 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CD320Q9NPF0 282 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 STARD7Q9NQZ5 370 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 FANCLQ9NW38 375 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 EHD3Q9NZN3 535 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 BTBD7Q9P203 1132 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ATP6V1HQ9UI12 483 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 DNAJC12Q9UKB3 198 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CAPN11Q9UMQ6 739 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PPIEQ9UNP9 301 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 B3GALT5Q9Y2C3 310 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MMP24Q9Y5R2 645 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MTCH2Q9Y6C9 303 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 IL16Q14005 1332 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms