RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 SRFBP1Q8NEF9 429 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-211ENST00000497978 NCLNQ969V3 563 aa10.97□□□□□ -0.65
NUDCD3-211ENST00000497978 QRFPRQ96P65 431 aa10.97□□□□□ -0.65
NUDCD3-211ENST00000497978 GPR22Q99680 433 aa10.97□□□□□ -0.65
NUDCD3-211ENST00000497978 RBBP8Q99708 897 aa10.97□□□□□ -0.65
NUDCD3-211ENST00000497978 ERP44Q9BS26 406 aa10.97□□□□□ -0.65
NUDCD3-211ENST00000497978 TMEM79Q9BSE2 394 aa10.97□□□□□ -0.65
NUDCD3-211ENST00000497978 ROGDIQ9GZN7 287 aa10.97□□□□□ -0.65
NUDCD3-211ENST00000497978 ADAP2Q9NPF8 381 aa10.97□□□□□ -0.65
NUDCD3-211ENST00000497978 TIMMDC1Q9NPL8 285 aa10.97□□□□□ -0.65
NUDCD3-211ENST00000497978 SMYD2Q9NRG4 433 aa10.97□□□□□ -0.65
NUDCD3-211ENST00000497978 RNF112Q9ULX5 631 aa10.97□□□□□ -0.65
NUDCD3-211ENST00000497978 PPIEQ9UNP9 301 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-211ENST00000497978 ITPR2Q14571 2701 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 MYO9AB2RTY4 2548 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 TCRBV9S1A1TA0A576 114 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 CXorf49A8MYA2 514 aaPredicted RBP10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 PEX1O43933 1283 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 CCNT2O60583 730 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 WISP3O95389 354 aaPredicted RBP10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 CLDN14O95500 239 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 IFNA16P05015 189 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 SNRPB2P08579 225 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 TFEBP19484 476 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 SPRP35270 261 aaPredicted RBP10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 KCNC1P48547 511 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 SSR4P51571 173 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 LIM2P55344 173 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 RAB10P61026 200 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 MRPS25P82663 173 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 HSF1Q00613 529 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 STX4Q12846 297 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 BMPR2Q13873 1038 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 DOC2AQ14183 400 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 OR4D1Q15615 310 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 ELAVL1Q15717 326 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 ADPRMQ3LIE5 342 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 FBXO48Q5FWF7 155 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 RNFT1Q5M7Z0 435 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 ABHD17CQ6PCB6 329 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 CLNKQ7Z7G1 428 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 ZNF227Q86WZ6 799 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 SULF2Q8IWU5 870 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 CTAGE3PQ8IX95 158 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 GPALPP1Q8IXQ4 340 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 PDPRQ8NCN5 879 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 AGAP11Q8TF27 550 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 DAZLQ92904 295 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 UBE2E3Q969T4 207 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 KIAA1191Q96A73 305 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 MTFMTQ96DP5 389 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 WDR34Q96EX3 536 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 KCNC2Q96PR1 638 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 PTBP2Q9UKA9 531 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 ZNF490Q9ULM2 529 aaPredicted RBP10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 DAPP1Q9UN19 280 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 ERVK-11Q9UQG0 969 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 YARS2Q9Y2Z4 477 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 UTP11Q9Y3A2 253 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 CLCA3PQ9Y6N3 262 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 SPACA6W5XKT8 324 aa10.96□□□□□ -0.65
NUDCD3-211ENST00000497978 GTF3C1Q12789 2109 aa10.96□□□□□ -0.66
NUDCD3-211ENST00000497978 FAM159BA6NKW6 160 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 A8MVJ9 347 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 E9PLN8 166 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 CTNSO60931 367 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 TUBB4AP04350 444 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 CERS1P27544 350 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 PPP2R1BP30154 601 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 PTGS2P35354 604 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 HNRNPFP52597 415 aaKnown RBP10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 IRF8Q02556 426 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 CAV1Q03135 178 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 CHIT1Q13231 466 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 TBCCQ15814 346 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 GRTP1Q5TC63 336 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 RAPH1Q70E73 1250 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 LRRC70Q7Z2Q7 622 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 VN1R5Q7Z5H4 357 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 DOLPP1Q86YN1 238 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 C7orf57Q8NEG2 295 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 SPATA4Q8NEY3 305 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 STAG3L4Q8TBR4 150 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 PHF10Q8WUB8 498 aaKnown RBP10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 ASB15Q8WXK1 588 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 EXT2Q93063 718 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 ESAMQ96AP7 390 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 UBXN10Q96LJ8 280 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 F2RL3Q96RI0 385 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 VKORC1Q9BQB6 163 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 TBCDQ9BTW9 1192 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 CD244Q9BZW8 370 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 LYRM4Q9HD34 91 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 HPF1Q9NWY4 346 aa10.95□□□□□ -0.66
NUDCD3-211ENST00000497978 NCOA6Q14686 2063 aaPredicted RBP10.94□□□□□ -0.66
NUDCD3-211ENST00000497978 PCNX1Q96RV3 2341 aa10.94□□□□□ -0.66
NUDCD3-211ENST00000497978 A0A1B0GTH9 108 aa10.94□□□□□ -0.66
NUDCD3-211ENST00000497978 TGFBR3LH3BV60 316 aa10.94□□□□□ -0.66
NUDCD3-211ENST00000497978 CYR61O00622 381 aa10.94□□□□□ -0.66
NUDCD3-211ENST00000497978 RAD51CO43502 376 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms