RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 SCYL1Q96KG9 808 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 RHBGQ9H310 441 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 PNO1Q9NRX1 252 aaKnown RBP15.23■□□□□ 0.03
VIM-208ENST00000497849 TUBA8Q9NY65 449 aaPredicted RBP15.23■□□□□ 0.03
VIM-208ENST00000497849 SAR1BQ9Y6B6 198 aa15.23■□□□□ 0.03
VIM-208ENST00000497849 SONP18583 2426 aaKnown RBP15.22■□□□□ 0.03
VIM-208ENST00000497849 TRGV5A0A0B4J1U4 118 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 CTAGE15A4D2H0 777 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 TGFBR3LH3BV60 316 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 WWP2O00308 870 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 OR1F1O43749 312 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 ZNF354AO60765 605 aaPredicted RBP15.22■□□□□ 0.03
VIM-208ENST00000497849 RNH1P13489 461 aaKnown RBP15.22■□□□□ 0.03
VIM-208ENST00000497849 NPPBP16860 134 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 TCP1P17987 556 aaKnown RBP15.22■□□□□ 0.03
VIM-208ENST00000497849 KCNJ1P48048 391 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 WNT3P56703 355 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 LCTLQ6UWM7 567 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 MBOAT1Q6ZNC8 495 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 FAM47EQ6ZV65 393 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 PIWIL4Q7Z3Z4 852 aaKnown RBP15.22■□□□□ 0.03
VIM-208ENST00000497849 CTAGE6Q86UF2 777 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 CREG2Q8IUH2 290 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 ARMC2Q8NEN0 867 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 OR4K1Q8NGD4 311 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 NT5CQ8TCD5 201 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 SREK1Q8WXA9 508 aaKnown RBP15.22■□□□□ 0.03
VIM-208ENST00000497849 KIAA1191Q96A73 305 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 Q96MF0 132 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 CCDC77Q9BR77 488 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 KIFC1Q9BW19 673 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 IL22Q9GZX6 179 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 CLK4Q9HAZ1 481 aaKnown RBP15.22■□□□□ 0.03
VIM-208ENST00000497849 MTRF1LQ9UGC7 380 aaKnown RBP15.22■□□□□ 0.03
VIM-208ENST00000497849 PCDHGB3Q9Y5G1 929 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 CUBNO60494 3623 aa15.22■□□□□ 0.03
VIM-208ENST00000497849 CHD3Q12873 2000 aaKnown RBP15.22■□□□□ 0.03
VIM-208ENST00000497849 PSMD12O00232 456 aaPredicted RBP15.21■□□□□ 0.03
VIM-208ENST00000497849 PFDN6O15212 129 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 LIASO43766 372 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 GOSR1O95249 250 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 SERPIND1P05546 499 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 ENO3P13929 434 aaPredicted RBP15.21■□□□□ 0.03
VIM-208ENST00000497849 OGNP20774 298 aaKnown RBP15.21■□□□□ 0.03
VIM-208ENST00000497849 ZNF136P52737 540 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 RAB8AP61006 207 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 HECTD2Q5U5R9 776 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 AGTRAPQ6RW13 159 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 RTL4Q6ZR62 310 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 ABHD13Q7L211 337 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 CILP2Q8IUL8 1156 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 P3H2Q8IVL5 708 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 SCUBE1Q8IWY4 988 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 LRRC75A-AS1Q8N1F1 130 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 CA13Q8N1Q1 262 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 ABHD11Q8NFV4 315 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 ACTRT1Q8TDG2 376 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 ALKBH8Q96BT7 664 aaKnown RBP15.21■□□□□ 0.03
VIM-208ENST00000497849 SGPP1Q9BX95 441 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 SPNS1Q9H2V7 528 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 EXO5Q9H790 373 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 SAMD15Q9P1V8 674 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 KLHL42Q9P2K6 505 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 ZNF629Q9UEG4 869 aaPredicted RBP15.21■□□□□ 0.03
VIM-208ENST00000497849 TRPS1Q9UHF7 1281 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 ADAMTS6Q9UKP5 1117 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 MMACHCQ9Y4U1 282 aa15.21■□□□□ 0.03
VIM-208ENST00000497849 TRIM64A6NGJ6 449 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 TRIM64BA6NI03 449 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 C4orf51C9J302 202 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 PGRMC1O00264 195 aaKnown RBP15.2■□□□□ 0.02
VIM-208ENST00000497849 SMIM10L1P0DMW3 83 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 CCL3P10147 92 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 HNF4AP41235 474 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 NAE1Q13564 534 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 ZNF549Q6P9A3 640 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 STRA8Q7Z7C7 330 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 KIF18BQ86Y91 864 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 CPNE9Q8IYJ1 553 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 FBXW8Q8N3Y1 598 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 GOLM1Q8NBJ4 401 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 SMIM10Q96HG1 83 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 YIPF4Q9BSR8 244 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 BDH2Q9BUT1 245 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 SACM1LQ9NTJ5 587 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 SYBUQ9NX95 663 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 PDE10AQ9Y233 779 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 DHRS7Q9Y394 339 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 ATG4BQ9Y4P1 393 aa15.2■□□□□ 0.02
VIM-208ENST00000497849 TRBC2A0A5B9 178 aa15.19■□□□□ 0.02
VIM-208ENST00000497849 CES2O00748 559 aa15.19■□□□□ 0.02
VIM-208ENST00000497849 URI1O94763 535 aaPredicted RBP15.19■□□□□ 0.02
VIM-208ENST00000497849 EPPINO95925 133 aa15.19■□□□□ 0.02
VIM-208ENST00000497849 C8BP07358 591 aa15.19■□□□□ 0.02
VIM-208ENST00000497849 RFPL3SP0C7P2 107 aa15.19■□□□□ 0.02
VIM-208ENST00000497849 ZSCAN5DPP0CG00 497 aa15.19■□□□□ 0.02
VIM-208ENST00000497849 MGAT1P26572 445 aa15.19■□□□□ 0.02
VIM-208ENST00000497849 NPY2RP49146 381 aa15.19■□□□□ 0.02
VIM-208ENST00000497849 CCR8P51685 355 aa15.19■□□□□ 0.02
VIM-208ENST00000497849 HK2P52789 917 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms