RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 PROSER1Q86XN7 944 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 MCATQ8IVS2 390 aaKnown RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 PGAM4Q8N0Y7 254 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 TMEM132CQ8N3T6 1108 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 D2HGDHQ8N465 521 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 ARHGEF39Q8N4T4 335 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 CSNK1A1LQ8N752 337 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 KCT2Q8NC54 265 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 KLHL6Q8WZ60 621 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 VPS33AQ96AX1 596 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 TM4SF18Q96CE8 201 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 COQ8BQ96D53 544 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 SLC41A2Q96JW4 573 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 NPAS2Q99743 824 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 MACROD1Q9BQ69 325 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 C17orf62Q9BQA9 187 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 CADM1Q9BY67 442 aaKnown RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 MMADHCQ9H3L0 296 aaPredicted RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 LRRN3Q9H3W5 708 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 ZNF768Q9H5H4 540 aaKnown RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 CCDC86Q9H6F5 360 aaKnown RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 REEP4Q9H6H4 257 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 LYARQ9NX58 379 aaKnown RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 MAP10Q9P2G4 905 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 EXO1Q9UQ84 846 aaKnown RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 SLC22A7Q9Y694 548 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 FER1L5A0AVI2 2057 aa13.46□□□□□ -0.26
VPS26A-209ENST00000497564 A0A088AWK7 358 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 A0A1W2PQM1 296 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 PMS2P1A4D2B8 440 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 HCRTR1O43613 425 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 LRATO95237 230 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 STATHP02808 62 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 GBAP04062 536 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 FURINP09958 794 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 ZNF888P0CJ79 500 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-209ENST00000497564 ZNF10P21506 573 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-209ENST00000497564 S100A3P33764 101 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 KIR3DL1P43629 444 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 DGKQP52824 942 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 EMP3P54852 163 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 MTTPP55157 894 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 VSX2P58304 361 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-209ENST00000497564 TAS2R50P59544 299 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 CCL7P80098 99 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 HSD11B2P80365 405 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 SLC25A3Q00325 362 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 KLC1Q07866 573 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 FOXM1Q08050 763 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 HKDC1Q2TB90 917 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 TRMT5Q32P41 509 aaKnown RBP13.45□□□□□ -0.26
VPS26A-209ENST00000497564 TCTE1Q5JU00 501 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 KIF2BQ8N4N8 673 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 ACOT4Q8N9L9 421 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 OR4D9Q8NGE8 314 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 DNAJB8Q8NHS0 232 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 SERINC2Q96SA4 455 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 PRPF18Q99633 342 aaKnown RBP13.45□□□□□ -0.26
VPS26A-209ENST00000497564 NUDT22Q9BRQ3 303 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 BHLHE41Q9C0J9 482 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-209ENST00000497564 GID8Q9NWU2 228 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 FAM120CQ9NX05 1096 aaKnown RBP13.45□□□□□ -0.26
VPS26A-209ENST00000497564 SOHLH2Q9NX45 425 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 MAN2B2Q9Y2E5 1009 aa13.45□□□□□ -0.26
VPS26A-209ENST00000497564 A0A1W2PNU3 283 aaPredicted RBP13.44□□□□□ -0.26
VPS26A-209ENST00000497564 FITM1A5D6W6 292 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 ANKRD65E5RJM6 399 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 FXYD1O00168 92 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 AKAP10O43572 662 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 TMPRSS11DO60235 418 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 GUCY1B2O75343 617 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 CSO75390 466 aaKnown RBP13.44□□□□□ -0.26
VPS26A-209ENST00000497564 RASSF9O75901 435 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 RPLP0P05388 317 aaKnown RBP13.44□□□□□ -0.26
VPS26A-209ENST00000497564 IL3P08700 152 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 FAM58BPP0C7Q3 252 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 COX7A2P14406 83 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 DRD2P14416 443 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 NQO1P15559 274 aaKnown RBP13.44□□□□□ -0.26
VPS26A-209ENST00000497564 DDX5P17844 614 aaKnown RBP13.44□□□□□ -0.26
VPS26A-209ENST00000497564 ALOX12P18054 663 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 DDCP20711 480 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 PDX1P52945 283 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 PHC1P78364 1004 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 C2orf80Q0P641 193 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 LRRC74AQ0VAA2 488 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 SLC9A5Q14940 896 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 HEPACAMQ14CZ8 416 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 MAPKAPK3Q16644 382 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 PAGE3Q5JUK9 113 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 WASHC2DQ5SRD0 308 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 CPTPQ5TA50 214 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 NIPAL1Q6NVV3 410 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 PRMT9Q6P2P2 845 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 USP53Q70EK8 1073 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 GPR180Q86V85 440 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 DEFB107AQ8IZN7 70 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 ARHGAP24Q8N264 748 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 NATD1Q8N6N6 113 aa13.44□□□□□ -0.26
VPS26A-209ENST00000497564 OR8K5Q8NH50 307 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms