RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 ZNF195O14628 629 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 TLX3O43711 291 aaPredicted RBP17.32■□□□□ 0.36
TSSC4-210ENST00000496468 RAB40ALP0C0E4 278 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 FAM58BPP0C7Q3 252 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 PRR35P0CG20 571 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 NR2F6P10588 404 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 TCN2P20062 427 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 EPHA3P29320 983 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 BUD31P41223 144 aaPredicted RBP17.32■□□□□ 0.36
TSSC4-210ENST00000496468 AQP5P55064 265 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 HNRNPH2P55795 449 aaKnown RBP17.32■□□□□ 0.36
TSSC4-210ENST00000496468 TNFRSF17Q02223 184 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 MAD2L1Q13257 205 aaPredicted RBP17.32■□□□□ 0.36
TSSC4-210ENST00000496468 SLC9B1Q4ZJI4 515 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 NXNQ6DKJ4 435 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 MRM1Q6IN84 353 aaKnown RBP17.32■□□□□ 0.36
TSSC4-210ENST00000496468 NOXRED1Q6NXP6 359 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 MRPL14Q6P1L8 145 aaKnown RBP17.32■□□□□ 0.36
TSSC4-210ENST00000496468 ACAD11Q709F0 780 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 GPR180Q86V85 440 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 ENDOVQ8N8Q3 282 aaKnown RBP17.32■□□□□ 0.36
TSSC4-210ENST00000496468 ZNF248Q8NDW4 579 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 CDC26Q8NHZ8 85 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 KCNE4Q8WWG9 221 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 TBC1D20Q96BZ9 403 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 MIEF2Q96C03 454 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 C11orf24Q96F05 449 aaPredicted RBP17.32■□□□□ 0.36
TSSC4-210ENST00000496468 THOC1Q96FV9 657 aaKnown RBP17.32■□□□□ 0.36
TSSC4-210ENST00000496468 FCRL1Q96LA6 429 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 CSF3RQ99062 836 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 C1orf50Q9BV19 199 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 NSRP1Q9H0G5 558 aaKnown RBP17.32■□□□□ 0.36
TSSC4-210ENST00000496468 WDR55Q9H6Y2 383 aaPredicted RBP17.32■□□□□ 0.36
TSSC4-210ENST00000496468 WDR54Q9H977 334 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 MS4A12Q9NXJ0 267 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 MRPS33Q9Y291 106 aaKnown RBP17.32■□□□□ 0.36
TSSC4-210ENST00000496468 FREM2Q5SZK8 3169 aa17.32■□□□□ 0.36
TSSC4-210ENST00000496468 ASPMQ8IZT6 3477 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 DNAJB6O75190 326 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 GUCY1B2O75343 617 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 FHP07954 510 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 CD63P08962 238 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 ANXA4P09525 319 aaPredicted RBP17.31■□□□□ 0.36
TSSC4-210ENST00000496468 ACPPP15309 386 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 LBPP18428 481 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 IL10P22301 178 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 CPN2P22792 545 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 JAK1P23458 1154 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 GSTM5P46439 218 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 RPS15P62841 145 aaKnown RBP17.31■□□□□ 0.36
TSSC4-210ENST00000496468 TRA2BP62995 288 aaKnown RBP17.31■□□□□ 0.36
TSSC4-210ENST00000496468 ERVK-8P63133 956 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 CLN3Q13286 438 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 KIAA0040Q15053 153 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 TGIF1Q15583 401 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 NKG7Q16617 165 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 SMU1Q2TAY7 513 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 RFTN2Q52LD8 501 aaPredicted RBP17.31■□□□□ 0.36
TSSC4-210ENST00000496468 C6orf136Q5SQH8 315 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 MFSD4BQ5TF39 518 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 UNQ6494/PRO21346Q6UXR6 183 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 PRSS58Q8IYP2 241 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 STT3BQ8TCJ2 826 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 NAF1Q96HR8 494 aaKnown RBP17.31■□□□□ 0.36
TSSC4-210ENST00000496468 MAELQ96JY0 434 aaKnown RBP17.31■□□□□ 0.36
TSSC4-210ENST00000496468 TGIF2Q9GZN2 237 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 SOX17Q9H6I2 414 aaPredicted RBP17.31■□□□□ 0.36
TSSC4-210ENST00000496468 GPN2Q9H9Y4 310 aaPredicted RBP17.31■□□□□ 0.36
TSSC4-210ENST00000496468 TEX10Q9NXF1 929 aaPredicted RBP17.31■□□□□ 0.36
TSSC4-210ENST00000496468 NOP53Q9NZM5 478 aaKnown RBP17.31■□□□□ 0.36
TSSC4-210ENST00000496468 DCTN4Q9UJW0 460 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 DLGAP4Q9Y2H0 992 aa17.31■□□□□ 0.36
TSSC4-210ENST00000496468 LOC101059948A0A1B0GTJ6 334 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 CNOT3O75175 753 aaKnown RBP17.3■□□□□ 0.36
TSSC4-210ENST00000496468 CDC123O75794 336 aaPredicted RBP17.3■□□□□ 0.36
TSSC4-210ENST00000496468 BMP10O95393 424 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 AIFM1O95831 613 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 ZGLP1P0C6A0 271 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 SDC1P18827 310 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 TLX1P31314 330 aaPredicted RBP17.3■□□□□ 0.36
TSSC4-210ENST00000496468 MINDY4Q4G0A6 757 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 VWA2Q5GFL6 755 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 OGFOD2Q6N063 350 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 CGB2Q6NT52 195 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 EPGNQ6UW88 154 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 LARP4Q71RC2 724 aaKnown RBP eCLIP17.3■□□□□ 0.36
TSSC4-210ENST00000496468 VASH2Q86V25 355 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 SHISA5Q8N114 240 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 RFWD2Q8NHY2 731 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 ACTRT2Q8TDY3 377 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 SPSB2Q99619 263 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 FAIM2Q9BWQ8 316 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 GPR87Q9BY21 358 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 FAM117AQ9C073 453 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 WDR41Q9HAD4 459 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 TCF7L2Q9NQB0 619 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 KCMF1Q9P0J7 381 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 KCND3Q9UK17 655 aa17.3■□□□□ 0.36
TSSC4-210ENST00000496468 EIF3LQ9Y262 564 aaKnown RBP17.3■□□□□ 0.36
TSSC4-210ENST00000496468 PTRH2Q9Y3E5 179 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms