RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 DHCR7Q9UBM7 475 aaKnown RBP8.19□□□□□ -1.1
U2AF1-212ENST00000496462 ERVK-11Q9UQG0 969 aa8.19□□□□□ -1.1
U2AF1-212ENST00000496462 SAP18O00422 153 aaKnown RBP8.19□□□□□ -1.1
U2AF1-212ENST00000496462 CPSF4O95639 269 aaKnown RBP8.19□□□□□ -1.1
U2AF1-212ENST00000496462 AGR2O95994 175 aa8.19□□□□□ -1.1
U2AF1-212ENST00000496462 MSL3P1P0C860 447 aa8.19□□□□□ -1.1
U2AF1-212ENST00000496462 CCL4P13236 92 aa8.19□□□□□ -1.1
U2AF1-212ENST00000496462 PSPHP78330 225 aa8.19□□□□□ -1.1
U2AF1-212ENST00000496462 ACTRT2Q8TDY3 377 aa8.19□□□□□ -1.1
U2AF1-212ENST00000496462 ZCCHC14Q8WYQ9 949 aaKnown RBP8.19□□□□□ -1.1
U2AF1-212ENST00000496462 MOAP1Q96BY2 351 aa8.19□□□□□ -1.1
U2AF1-212ENST00000496462 GSTO2Q9H4Y5 243 aa8.19□□□□□ -1.1
U2AF1-212ENST00000496462 LHX9Q9NQ69 397 aa8.19□□□□□ -1.1
U2AF1-212ENST00000496462 VPS4AQ9UN37 437 aa8.19□□□□□ -1.1
U2AF1-212ENST00000496462 PCYT1BQ9Y5K3 369 aaPredicted RBP8.19□□□□□ -1.1
U2AF1-212ENST00000496462 URB1O60287 2271 aaKnown RBP8.18□□□□□ -1.1
U2AF1-212ENST00000496462 EML5Q05BV3 1969 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 HMX2A2RU54 273 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 H3BNH8 94 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 SGK494L7N484 410 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 STATHP02808 62 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 RAB40ALP0C0E4 278 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 MTHFD2P13995 350 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 ITIH1P19827 911 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 ATP5A1P25705 553 aaKnown RBP8.18□□□□□ -1.1
U2AF1-212ENST00000496462 CSF2RBP32927 897 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 OR1D4P47884 311 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 TMPRSS3P57727 454 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 SH3BP2P78314 561 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 TXNL4AP83876 142 aaKnown RBP8.18□□□□□ -1.1
U2AF1-212ENST00000496462 SHC2P98077 582 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 CYLC2Q14093 348 aaPredicted RBP8.18□□□□□ -1.1
U2AF1-212ENST00000496462 RFTN2Q52LD8 501 aaPredicted RBP8.18□□□□□ -1.1
U2AF1-212ENST00000496462 ZCCHC7Q8N3Z6 543 aaKnown RBP8.18□□□□□ -1.1
U2AF1-212ENST00000496462 TMEM156Q8N614 296 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 SLC22A8Q8TCC7 542 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 BCAS4Q8TDM0 211 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 SLC26A7Q8TE54 656 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 NSUN5Q96P11 429 aaKnown RBP8.18□□□□□ -1.1
U2AF1-212ENST00000496462 LRRC37BQ96QE4 947 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 PRDM9Q9NQV7 894 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 STARD5Q9NSY2 213 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 STOML1Q9UBI4 398 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 UTS2RQ9UKP6 389 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 BAG5Q9UL15 447 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 SNX8Q9Y5X2 465 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 B3GALT1Q9Y5Z6 326 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 C15orf38-AP3S2A0A0A6YYH1 394 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 C10orf142B7Z368 130 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 MKRN2OSH3BPM6 223 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 TOP3BO95985 862 aaKnown RBP8.18□□□□□ -1.1
U2AF1-212ENST00000496462 HMGCS1Q01581 520 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 TRAF3Q13114 568 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 SSPNQ14714 243 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 ABHD17CQ6PCB6 329 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 ARPINQ7Z6K5 226 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 METTL4Q8N3J2 472 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 OR4K1Q8NGD4 311 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 OR14A16Q8NHC5 309 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 ITCHQ96J02 903 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 SLC25A23Q9BV35 468 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 CHST8Q9H2A9 424 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 KCNK13Q9HB14 408 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 DLGAP4Q9Y2H0 992 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 ZFYVE26Q68DK2 2539 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 CCDC154A6NI56 674 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 DUXAA6NLW8 204 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 SRRM3A6NNA2 597 aaPredicted RBP8.18□□□□□ -1.1
U2AF1-212ENST00000496462 GALR3O60755 368 aaPredicted RBP8.18□□□□□ -1.1
U2AF1-212ENST00000496462 ALOX12BO75342 701 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 SLC22A3O75751 556 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 FGF3P11487 239 aaPredicted RBP8.18□□□□□ -1.1
U2AF1-212ENST00000496462 PORP16435 677 aaPredicted RBP8.18□□□□□ -1.1
U2AF1-212ENST00000496462 ADSLP30566 484 aaPredicted RBP8.18□□□□□ -1.1
U2AF1-212ENST00000496462 CDCP2Q5VXM1 449 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 FCRL6Q6DN72 434 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 FAAH2Q6GMR7 532 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 NOXRED1Q6NXP6 359 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 FBXO42Q6P3S6 717 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 OVCH1Q7RTY7 1134 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 NACC2Q96BF6 587 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 ZNF501Q96CX3 271 aaPredicted RBP8.18□□□□□ -1.1
U2AF1-212ENST00000496462 NEUROD4Q9HD90 331 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 SELENONQ9NZV5 590 aa8.18□□□□□ -1.1
U2AF1-212ENST00000496462 MUC22E2RYF6 1773 aaPredicted RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 TP53I11O14683 189 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 C1QAP02745 245 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 ESRRAP11474 423 aaPredicted RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 UQCRBP14927 111 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 OC90Q02509 493 aaPredicted RBP8.17□□□□□ -1.1
U2AF1-212ENST00000496462 GRB7Q14451 532 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 TBC1D25Q3MII6 688 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 KANK2Q63ZY3 851 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 COMMD6Q7Z4G1 85 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 B3GNT8Q7Z7M8 397 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 LIX1Q8N485 282 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 ZNF781Q8N8C0 355 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 MZB1Q8WU39 189 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 SLC46A1Q96NT5 459 aa8.17□□□□□ -1.1
U2AF1-212ENST00000496462 OR2A5Q96R48 311 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms