RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 ZNF682O95780 498 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 IFNA4P05014 189 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 GAAP10253 952 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 CDC42P60953 191 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 CAMK2DQ13557 499 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 LAPTM4AQ15012 233 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 SPHARQ15513 63 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 C9orf50Q5SZB4 431 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 OTUD1Q5VV17 481 aaPredicted RBP8.7□□□□□ -1.02
HPS4-217ENST00000496385 FAM219BQ5XKK7 198 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 BHLHB9Q6PI77 547 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 CHRDL2Q6WN34 429 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 FAM9CQ8IZT9 166 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 UBE2J2Q8N2K1 259 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 DBF4BQ8NFT6 615 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 OR11H4Q8NGC9 324 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 GPR150Q8NGU9 434 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 COQ10AQ96MF6 247 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 SEC22CQ9BRL7 303 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 MND1Q9BWT6 205 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 FSD1LQ9BXM9 530 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 DPY30Q9C005 99 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 CDT1Q9H211 546 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 CRISPLD1Q9H336 500 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 BIN3Q9NQY0 253 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 RAD18Q9NS91 495 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 COPZ2Q9P299 210 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 EPHA6Q9UF33 1036 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 ZNF225Q9UK10 706 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 DUSP12Q9UNI6 340 aa8.7□□□□□ -1.02
HPS4-217ENST00000496385 EYSQ5T1H1 3165 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 ZNF638Q14966 1978 aaKnown RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 CHD7Q9P2D1 2997 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 PRAMEF33A0A0G2JMD5 474 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 A0A1B0GTL3 188 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 LOC285095A0A1B0GVY8 99 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 LCHNA4D1U4 455 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 H3BM21 787 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 M0QYT0 321 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 DNASE2O00115 360 aaPredicted RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 AIPO00170 330 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 KPNA3O00505 521 aaPredicted RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 PRAMEF10O60809 474 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 PEPDP12955 493 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 DNASE1P24855 282 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 CALCRP30988 508 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 MMP12P39900 470 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 TGM4P49221 684 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 CSTF1Q05048 431 aaKnown RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 HNRNPA0Q13151 305 aaKnown RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 PCBP1Q15365 356 aaKnown RBP eCLIP8.69□□□□□ -1.02
HPS4-217ENST00000496385 SNAPC1Q16533 368 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 RBBP7Q16576 425 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 AP5B1Q2VPB7 878 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 PLA1AQ53H76 456 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 C3orf38Q5JPI3 329 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 ZNF730Q6ZMV8 503 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 RASSF6Q6ZTQ3 369 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 FAM92BQ6ZTR7 304 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 MSANTD1Q6ZTZ1 278 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 ACOT1Q86TX2 421 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 MCATQ8IVS2 390 aaKnown RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 NPWQ8N729 165 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 PROKR2Q8NFJ6 384 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 ST8SIA2Q92186 375 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 SGK3Q96BR1 496 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 OTUB1Q96FW1 271 aaPredicted RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 KCNC2Q96PR1 638 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 SLC2A13Q96QE2 648 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 CLMPQ9H6B4 373 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 SIRT5Q9NXA8 310 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 PURGQ9UJV8 347 aaKnown RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 ZNF222Q9UK12 451 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 TRPV2Q9Y5S1 764 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 CFAP20Q9Y6A4 193 aaKnown RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 TSC2P49815 1807 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 LTBP2Q14767 1821 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 MEIKINA0A087WXM9 373 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 ADAMDEC1O15204 470 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 SSX5O60225 188 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 TPST2O60704 377 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 BTF3P20290 206 aaKnown RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 APEX1P27695 318 aaKnown RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 RORAP35398 523 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 EVX1P49640 407 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 VLDLRP98155 873 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 C1DQ13901 141 aaKnown RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 GRM7Q14831 915 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 TMEM132DQ14C87 1099 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 NR6A1Q15406 480 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 FAM174BQ3ZCQ3 159 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 IQCCQ4KMZ1 466 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 CCDC36Q8IYA8 594 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 RYBPQ8N488 228 aaPredicted RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 SPATA22Q8NHS9 363 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 CEP76Q8TAP6 659 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 PGAP3Q96FM1 320 aaPredicted RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 KCTD7Q96MP8 289 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 SLC38A2Q96QD8 506 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 MAPKAP1Q9BPZ7 522 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms