RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.77□□□□□ -0.85
HDAC3-214ENST00000495485 NAT6Q93015 286 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 FAM162AQ96A26 154 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 RERGQ96A58 199 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-214ENST00000495485 EME1Q96AY2 570 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 ZBED6CLQ96FA7 236 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-214ENST00000495485 NAF1Q96HR8 494 aaKnown RBP9.77□□□□□ -0.85
HDAC3-214ENST00000495485 REXO5Q96IC2 774 aaKnown RBP9.77□□□□□ -0.85
HDAC3-214ENST00000495485 ZNF583Q96ND8 569 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 F2RL3Q96RI0 385 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 CPPED1Q9BRF8 314 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-214ENST00000495485 BDH2Q9BUT1 245 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 SPNS1Q9H2V7 528 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 KAT8Q9H7Z6 458 aaKnown RBP9.77□□□□□ -0.85
HDAC3-214ENST00000495485 UCK1Q9HA47 277 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 SERHLQ9NQF3 203 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 GIMAP4Q9NUV9 329 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 LYARQ9NX58 379 aaKnown RBP9.77□□□□□ -0.85
HDAC3-214ENST00000495485 TAS2R9Q9NYW1 312 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 ACTR10Q9NZ32 417 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 EHD3Q9NZN3 535 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 SLAMF8Q9P0V8 285 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 FTSJ1Q9UET6 329 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 KLF15Q9UIH9 416 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 RPS6KA6Q9UK32 745 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 AURKCQ9UQB9 309 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 DTNAQ9Y4J8 743 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 NCOR2Q9Y618 2525 aa9.77□□□□□ -0.85
HDAC3-214ENST00000495485 HEATR5BQ9P2D3 2071 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 TRBV23OR9-2A0A075B6M9 112 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 TRBV5-3A0A0A0MS03 114 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 A0A0J9YY10 115 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 LRIT2A6NDA9 550 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 CXCR6O00574 342 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 PDPK1O15530 556 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 GDF9O60383 454 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 CBFA2T3O75081 653 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 LDOC1O95751 146 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-214ENST00000495485 IFNA14P01570 189 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 IL3P08700 152 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 LAMP1P11279 417 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 PNLIPP16233 465 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 IL1RNP18510 177 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 TPP2P29144 1249 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-214ENST00000495485 TLX1P31314 330 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-214ENST00000495485 BSGP35613 385 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 SKP1P63208 163 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 UBE2IP63279 158 aaKnown RBP9.76□□□□□ -0.85
HDAC3-214ENST00000495485 VAC14Q08AM6 782 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 RBBP4Q09028 425 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 FADDQ13158 208 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 GPR18Q14330 331 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 SHBQ15464 509 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 ZIC1Q15915 447 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 CLPPQ16740 277 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-214ENST00000495485 ADPRMQ3LIE5 342 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 TOR1AIP1Q5JTV8 583 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 TPRG1LQ5T0D9 272 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 C6orf132Q5T0Z8 1188 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 INTS11Q5TA45 600 aaKnown RBP9.76□□□□□ -0.85
HDAC3-214ENST00000495485 ZNF425Q6IV72 752 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 NIPAL1Q6NVV3 410 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 BHLHB9Q6PI77 547 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 FIGLAQ6QHK4 219 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 IZUMO2Q6UXV1 221 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 TMEM26Q6ZUK4 368 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 ABHD13Q7L211 337 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 VN1R5Q7Z5H4 357 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 PAQR7Q86WK9 346 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 ZCCHC7Q8N3Z6 543 aaKnown RBP9.76□□□□□ -0.85
HDAC3-214ENST00000495485 BAHD1Q8TBE0 780 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-214ENST00000495485 NT5CQ8TCD5 201 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 LMX1AQ8TE12 382 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 RHBDD1Q8TEB9 315 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 CREB3L4Q8TEY5 395 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 CANT1Q8WVQ1 401 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 FIG4Q92562 907 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 NCLNQ969V3 563 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 GAL3ST3Q96A11 431 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 RNF145Q96MT1 663 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 BTBD9Q96Q07 612 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 C9orf16Q9BUW7 83 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 LRRC61Q9BV99 259 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 ASPSCR1Q9BZE9 553 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 TPT1P8Q9HAU6 139 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 NEUROD4Q9HD90 331 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 SLC6A20Q9NP91 592 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 RXFP3Q9NSD7 469 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 THUMPD1Q9NXG2 353 aaKnown RBP9.76□□□□□ -0.85
HDAC3-214ENST00000495485 MS4A12Q9NXJ0 267 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 SAMD4AQ9UPU9 718 aaKnown RBP9.76□□□□□ -0.85
HDAC3-214ENST00000495485 LRCH1Q9Y2L9 728 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 PCDHGA4Q9Y5G9 962 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 KLK4Q9Y5K2 254 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 SPACA6W5XKT8 324 aa9.76□□□□□ -0.85
HDAC3-214ENST00000495485 C1orf226A1L170 272 aa9.75□□□□□ -0.85
HDAC3-214ENST00000495485 TMEM247A6NEH6 219 aa9.75□□□□□ -0.85
HDAC3-214ENST00000495485 BTN3A3O00478 584 aa9.75□□□□□ -0.85
HDAC3-214ENST00000495485 HAT1O14929 419 aa9.75□□□□□ -0.85
HDAC3-214ENST00000495485 ZSCAN9O15535 394 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms