RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 PPP6CO00743 305 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 PLIN3O60664 434 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 OR4F21O95013 312 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 PROCP04070 461 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 CELA2AP08217 269 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 TSFMP43897 325 aaKnown RBP14.97□□□□□ -0.01
LIME1-209ENST00000494776 SLC18A2Q05940 514 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 SLAMF1Q13291 335 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 CUL3Q13618 768 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 EXT1Q16394 746 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 NADK2Q4G0N4 442 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 C10orf62Q5T681 223 aaPredicted RBP14.97□□□□□ -0.01
LIME1-209ENST00000494776 JMJD6Q6NYC1 403 aaPredicted RBP14.97□□□□□ -0.01
LIME1-209ENST00000494776 LETMD1Q6P1Q0 360 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 ISLR2Q6UXK2 745 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 ZNF793Q6ZN11 406 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 LINC00696Q6ZRV3 163 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 SRRM1Q8IYB3 904 aaKnown RBP14.97□□□□□ -0.01
LIME1-209ENST00000494776 ZNF595Q8IYB9 648 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 SIRT6Q8N6T7 355 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 RDH11Q8TC12 318 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 BRIX1Q8TDN6 353 aaKnown RBP14.97□□□□□ -0.01
LIME1-209ENST00000494776 L3HYPDHQ96EM0 354 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 IMMP1LQ96LU5 166 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 SERPINI1Q99574 410 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 MAPKAP1Q9BPZ7 522 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 SORBS1Q9BX66 1292 aaKnown RBP14.97□□□□□ -0.01
LIME1-209ENST00000494776 PSD3Q9NYI0 1048 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 TRPS1Q9UHF7 1281 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 LGALS13Q9UHV8 139 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 MID2Q9UJV3 735 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 FBXW2Q9UKT8 454 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 HELZ2Q9BYK8 2649 aaKnown RBP14.97□□□□□ -0.01
LIME1-209ENST00000494776 TNRC6AQ8NDV7 1962 aaKnown RBP14.96□□□□□ -0.01
LIME1-209ENST00000494776 GCN1Q92616 2671 aaKnown RBP14.96□□□□□ -0.01
LIME1-209ENST00000494776 A8MUA0 341 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 G3V2L1 256 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 PLPP1O14494 284 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 ITGAMP11215 1152 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 CPA3P15088 417 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 CPN2P22792 545 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 CASRP41180 1078 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 ARFIP1P53367 373 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 HSD17B7P56937 341 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 KRT71Q3SY84 523 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 CRB2Q5IJ48 1285 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 CFAP157Q5JU67 520 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 PLAG1Q6DJT9 500 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 CYP20A1Q6UW02 462 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 GPRIN3Q6ZVF9 776 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 CLNKQ7Z7G1 428 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 TRABD2AQ86V40 505 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 EFCAB3Q8N7B9 438 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 CDYL2Q8N8U2 506 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 MYRIPQ8NFW9 859 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 SELENOMQ8WWX9 145 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 APOPT1Q96IL0 206 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 SMC6Q96SB8 1091 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 ZNF382Q96SR6 550 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 CSF3RQ99062 836 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 C12orf65Q9H3J6 166 aaKnown RBP14.96□□□□□ -0.01
LIME1-209ENST00000494776 KCNK13Q9HB14 408 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 SLAMF7Q9NQ25 335 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 NECTIN3Q9NQS3 549 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 PNO1Q9NRX1 252 aaKnown RBP14.96□□□□□ -0.01
LIME1-209ENST00000494776 AHSPQ9NZD4 102 aa14.96□□□□□ -0.01
LIME1-209ENST00000494776 A0A1B0GTL3 188 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 TCRBV16S1A1N1A0A5B0 115 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 TTLL8A6PVC2 850 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 A8MUI8 341 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 CYR61O00622 381 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 ERLIN1O75477 346 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 SCELO95171 688 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 KRT6AP02538 564 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 KRT6BP04259 564 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 HMOX2P30519 316 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 TLX1P31314 330 aaPredicted RBP14.95□□□□□ -0.02
LIME1-209ENST00000494776 KRT6CP48668 564 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 NAA20P61599 178 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 STX4Q12846 297 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 LCP2Q13094 533 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 IGFL3Q6UXB1 125 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 RBMXL3Q8N7X1 1067 aaKnown RBP14.95□□□□□ -0.02
LIME1-209ENST00000494776 TMEM52Q8NDY8 209 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 M1APQ8TC57 530 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 METTL6Q8TCB7 284 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 LMF1Q96S06 567 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 WDR77Q9BQA1 342 aaPredicted RBP14.95□□□□□ -0.02
LIME1-209ENST00000494776 TMEM109Q9BVC6 243 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 TRIM4Q9C037 500 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 EPN3Q9H201 632 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 ZBTB20Q9HC78 741 aaPredicted RBP14.95□□□□□ -0.02
LIME1-209ENST00000494776 NMRK1Q9NWW6 199 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 MS4A12Q9NXJ0 267 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 KCMF1Q9P0J7 381 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 TEKT2Q9UIF3 430 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 PHF11Q9UIL8 331 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 SLC12A4Q9UP95 1085 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 BOD1L1Q8NFC6 3051 aa14.95□□□□□ -0.02
LIME1-209ENST00000494776 IGKV3D-11A0A0A0MRZ8 115 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms