RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 PIK3CBP42338 1070 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 PIK3CGP48736 1102 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 CCL11P51671 97 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 HERVK_113P63132 956 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 SKP1P63208 163 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 OLR1P78380 273 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 BTN3A2P78410 334 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 NFATC3Q12968 1075 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 AIMP2Q13155 320 aaKnown RBP8.25□□□□□ -1.09
ITGB1-217ENST00000494395 MYBPC3Q14896 1274 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 HIST2H2ACQ16777 129 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-217ENST00000494395 GGTA1PQ4G0N0 100 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 LACTB2Q53H82 288 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-217ENST00000494395 UNC50Q53HI1 259 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 ZNF678Q5SXM1 525 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 FAM219BQ5XKK7 198 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 HIST2H2AA3Q6FI13 130 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 FAAH2Q6GMR7 532 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 ZNF793Q6ZN11 406 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 LANCL3Q6ZV70 420 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 TRABD2AQ86V40 505 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 RNF175Q8N4F7 328 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 AMER2Q8N7J2 671 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 CLEC1AQ8NC01 280 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 PLPP5Q8NEB5 264 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 HUS1BQ8NHY5 278 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 UBE2E3Q969T4 207 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 TBC1D20Q96BZ9 403 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 L3HYPDHQ96EM0 354 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 IMMP1LQ96LU5 166 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 TMEM237Q96Q45 408 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 F2RL3Q96RI0 385 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 WDR77Q9BQA1 342 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-217ENST00000494395 TMEM109Q9BVC6 243 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 YIPF2Q9BWQ6 316 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 NPLQ9BXD5 320 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-217ENST00000494395 ERVK-6Q9BXR3 956 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 ZNF717Q9BY31 904 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-217ENST00000494395 ROPN1BQ9BZX4 212 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-217ENST00000494395 REXO4Q9GZR2 422 aaKnown RBP8.25□□□□□ -1.09
ITGB1-217ENST00000494395 ZNF700Q9H0M5 742 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 NOL11Q9H8H0 719 aaKnown RBP8.25□□□□□ -1.09
ITGB1-217ENST00000494395 ACTR8Q9H981 624 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 ROPN1Q9HAT0 212 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-217ENST00000494395 DMRT3Q9NQL9 472 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 DCDC2Q9UHG0 476 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 ADGRE2Q9UHX3 823 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 RNF11Q9Y3C5 154 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 ANGPTL3Q9Y5C1 460 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 PCDHGB7Q9Y5F8 929 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 CLDN16Q9Y5I7 305 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 CFAP46Q8IYW2 2715 aa8.25□□□□□ -1.09
ITGB1-217ENST00000494395 SPENQ96T58 3664 aaKnown RBP8.25□□□□□ -1.09
ITGB1-217ENST00000494395 ELOA3CA0A087WX78 387 aaPredicted RBP8.24□□□□□ -1.09
ITGB1-217ENST00000494395 ELOA3DA6NLF2 546 aaPredicted RBP8.24□□□□□ -1.09
ITGB1-217ENST00000494395 MAGEB17A8MXT2 336 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 B8ZZF3 427 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 FAM227AF5H4B4 570 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 FOXE1O00358 373 aaPredicted RBP8.24□□□□□ -1.09
ITGB1-217ENST00000494395 CYR61O00622 381 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 CLDN9O95484 217 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 ETHE1O95571 254 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 TGFB1P01137 390 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 C8orf89P0DMQ9 161 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 PCNAP12004 261 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 RNH1P13489 461 aaKnown RBP8.24□□□□□ -1.09
ITGB1-217ENST00000494395 KRT15P19012 456 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 ATP5A1P25705 553 aaKnown RBP8.24□□□□□ -1.09
ITGB1-217ENST00000494395 HPDP32754 393 aaPredicted RBP8.24□□□□□ -1.09
ITGB1-217ENST00000494395 CRHR1P34998 444 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 CCNG1P51959 295 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 HNRNPFP52597 415 aaKnown RBP8.24□□□□□ -1.09
ITGB1-217ENST00000494395 PLA2G16P53816 162 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 PRKAA2P54646 552 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 CDH13P55290 713 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 EEF1A2Q05639 463 aaKnown RBP8.24□□□□□ -1.09
ITGB1-217ENST00000494395 ZRSR2Q15696 482 aaKnown RBP8.24□□□□□ -1.09
ITGB1-217ENST00000494395 CPSF6Q16630 551 aaKnown RBP eCLIP8.24□□□□□ -1.09
ITGB1-217ENST00000494395 ELOA3BQ3SY89 546 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 TMEM35AQ53FP2 167 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 DEPDC1Q5TB30 811 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 VWA5B1Q5TIE3 1220 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 KHDRBS2Q5VWX1 349 aaKnown RBP8.24□□□□□ -1.09
ITGB1-217ENST00000494395 LETMD1Q6P1Q0 360 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 TRIM40Q6P9F5 258 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 ZYG11AQ6WRX3 759 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 QSOX2Q6ZRP7 698 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 ANKRD37Q7Z713 158 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 SLC22A9Q8IVM8 553 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 SCUBE1Q8IWY4 988 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 GALNT16Q8N428 558 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 TMEM52Q8NDY8 209 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 MYRIPQ8NFW9 859 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 ELOA3Q8NG57 546 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 OR4F6Q8NGB9 312 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 CCT6BQ92526 530 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 PSMF1Q92530 271 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 TSLPQ969D9 159 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 CMTM7Q96FZ5 175 aa8.24□□□□□ -1.09
ITGB1-217ENST00000494395 SERINC2Q96SA4 455 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms