RNA–Protein interactions for RNA: ENST00000494340.1

LINC02008-202, Transcript of long intergenic non-protein coding RNA 2008, humanhuman

TSL 2

Gene LINC02008, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02008-202ENST00000494340 COPS7BQ9H9Q2 264 aaPredicted RBP9.03□□□□□ -0.96
LINC02008-202ENST00000494340 TIMMDC1Q9NPL8 285 aa9.03□□□□□ -0.96
LINC02008-202ENST00000494340 SMYD2Q9NRG4 433 aa9.03□□□□□ -0.96
LINC02008-202ENST00000494340 PLSCR2Q9NRY7 297 aa9.03□□□□□ -0.96
LINC02008-202ENST00000494340 VTI1BQ9UEU0 232 aa9.03□□□□□ -0.96
LINC02008-202ENST00000494340 ZNF223Q9UK11 482 aaPredicted RBP9.03□□□□□ -0.96
LINC02008-202ENST00000494340 PTBP2Q9UKA9 531 aaKnown RBP9.03□□□□□ -0.96
LINC02008-202ENST00000494340 MTO1Q9Y2Z2 717 aaKnown RBP9.03□□□□□ -0.96
LINC02008-202ENST00000494340 ASB1Q9Y576 335 aa9.03□□□□□ -0.96
LINC02008-202ENST00000494340 PKDREJQ9NTG1 2253 aa9.02□□□□□ -0.96
LINC02008-202ENST00000494340 TCRBV9S1A1TA0A576 114 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 CYR61O00622 381 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 TFECO14948 347 aaPredicted RBP9.02□□□□□ -0.97
LINC02008-202ENST00000494340 PEX1O43933 1283 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 WISP2O76076 250 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 C1QAP02745 245 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 S100BP04271 92 aaPredicted RBP9.02□□□□□ -0.97
LINC02008-202ENST00000494340 CCDC166P0CW27 439 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 ELAVL4P26378 380 aaKnown RBP9.02□□□□□ -0.97
LINC02008-202ENST00000494340 SSTR1P30872 391 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 MEOX1P50221 254 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 ARFIP1P53367 373 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 LIM2P55344 173 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 RAB10P61026 200 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 SLC13A2Q13183 592 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 DOC2AQ14183 400 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 TMEM35AQ53FP2 167 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 XKR6Q5GH73 641 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 RGS9BPQ6ZS82 235 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 VN1R5Q7Z5H4 357 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 DOLPP1Q86YN1 238 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 SULF2Q8IWU5 870 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 TMEM156Q8N614 296 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 ACBD4Q8NC06 268 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 STAG3L4Q8TBR4 150 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 FAM57AQ8TBR7 257 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 AGAP11Q8TF27 550 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 UBTD2Q8WUN7 234 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 CCT6BQ92526 530 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 ANP32BQ92688 251 aaKnown RBP9.02□□□□□ -0.97
LINC02008-202ENST00000494340 NCLNQ969V3 563 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 SPOCK3Q9BQ16 436 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 TBCDQ9BTW9 1192 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 SAYSD1Q9NPB0 183 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 NUDT4Q9NZJ9 180 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 ADGRE2Q9UHX3 823 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 SH3BGRL2Q9UJC5 107 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 FBXW2Q9UKT8 454 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 ZNF490Q9ULM2 529 aaPredicted RBP9.02□□□□□ -0.97
LINC02008-202ENST00000494340 TSC22D4Q9Y3Q8 395 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 SPACA6W5XKT8 324 aa9.02□□□□□ -0.97
LINC02008-202ENST00000494340 NCF1BA6NI72 391 aaPredicted RBP9.01□□□□□ -0.97
LINC02008-202ENST00000494340 A8MUA0 341 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 A8MVJ9 347 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 NCF1CA8MVU1 366 aaPredicted RBP9.01□□□□□ -0.97
LINC02008-202ENST00000494340 CXorf49A8MYA2 514 aaPredicted RBP9.01□□□□□ -0.97
LINC02008-202ENST00000494340 TGFBR3LH3BV60 316 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 PRAMEF4O60810 478 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 TUBB4AP04350 444 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 NCF1P14598 390 aaPredicted RBP9.01□□□□□ -0.97
LINC02008-202ENST00000494340 CRABP2P29373 138 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 SSTR2P30874 369 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 STX2P32856 288 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 PTGS2P35354 604 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 HSPA7P48741 367 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 HNRNPFP52597 415 aaKnown RBP9.01□□□□□ -0.97
LINC02008-202ENST00000494340 PLA2G16P53816 162 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 IRF8Q02556 426 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 OR4D1Q15615 310 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 C18orf21Q32NC0 220 aaPredicted RBP9.01□□□□□ -0.97
LINC02008-202ENST00000494340 RNFT1Q5M7Z0 435 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 PRAMEF9Q5VWM5 478 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 TMEM211Q6ICI0 200 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 ARHGAP11AQ6P4F7 1023 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 PAOXQ6QHF9 649 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 HSDL2Q6YN16 418 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 C3orf62Q6ZUJ4 267 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 FGD2Q7Z6J4 655 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 SRRM1Q8IYB3 904 aaKnown RBP9.01□□□□□ -0.97
LINC02008-202ENST00000494340 LAS2Q8IYD9 372 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 SNX31Q8N9S9 440 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 FAM47BQ8NA70 645 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 GOLM1Q8NBJ4 401 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 TMEM52Q8NDY8 209 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 SPATA4Q8NEY3 305 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 OR5L2Q8NGL0 311 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 C14orf79Q96F83 325 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 PHF12Q96QT6 1004 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 TREX2Q9BQ50 279 aaPredicted RBP9.01□□□□□ -0.97
LINC02008-202ENST00000494340 MS4A8Q9BY19 250 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 TRIM8Q9BZR9 551 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 CD244Q9BZW8 370 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 TSPAN10Q9H1Z9 355 aaPredicted RBP9.01□□□□□ -0.97
LINC02008-202ENST00000494340 CAB39LQ9H9S4 337 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 NMRAL1Q9HBL8 299 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 PRDM7Q9NQW5 492 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 PNO1Q9NRX1 252 aaKnown RBP9.01□□□□□ -0.97
LINC02008-202ENST00000494340 HPF1Q9NWY4 346 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 MS4A12Q9NXJ0 267 aa9.01□□□□□ -0.97
LINC02008-202ENST00000494340 GRHL1Q9NZI5 618 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms