RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 MS4A12Q9NXJ0 267 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 VPS29Q9UBQ0 182 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 PHF11Q9UIL8 331 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 FBXL4Q9UKA2 621 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 FBXW2Q9UKT8 454 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 FIS1Q9Y3D6 152 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 HS3ST3B1Q9Y662 390 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 SCN2AQ99250 2005 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 HMGB1P1B2RPK0 211 aaPredicted RBP11.75□□□□□ -0.53
TRA2A-209ENST00000494255 TMEM114B3SHH9 223 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 FAM227AF5H4B4 570 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 ERVH48-1M5A8F1 160 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 EEDO75530 441 aaKnown RBP11.75□□□□□ -0.53
TRA2A-209ENST00000494255 HSPA4LO95757 839 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 CHRNGP07510 517 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 CPN2P22792 545 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 GRK2P25098 689 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 TLX1P31314 330 aaPredicted RBP11.75□□□□□ -0.53
TRA2A-209ENST00000494255 BSGP35613 385 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 RHAGQ02094 409 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 ABRAXAS2Q15018 415 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 NSDHLQ15738 373 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 FAM219BQ5XKK7 198 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 CLEC6AQ6EIG7 209 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 KIRREL2Q6UWL6 708 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 QSOX2Q6ZRP7 698 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 SHISA5Q8N114 240 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 METTL4Q8N3J2 472 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 CLEC1AQ8NC01 280 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 PLPP5Q8NEB5 264 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 TTC9Q92623 222 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 PTCHD1Q96NR3 888 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 MAPKAP1Q9BPZ7 522 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 ING2Q9H160 280 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 DDX31Q9H8H2 851 aaKnown RBP11.75□□□□□ -0.53
TRA2A-209ENST00000494255 TNFRSF12AQ9NP84 129 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 PRDM9Q9NQV7 894 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 ADAM29Q9UKF5 820 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 MMACHCQ9Y4U1 282 aa11.75□□□□□ -0.53
TRA2A-209ENST00000494255 PKD1L2Q7Z442 2459 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 A0A0A6YYD5 115 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 SERTM1A2A2V5 107 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 BLACEA4D250 179 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 OR2W5A6NFC9 320 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 SNUPNO95149 360 aaKnown RBP11.74□□□□□ -0.53
TRA2A-209ENST00000494255 FAM58BPP0C7Q3 252 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 SERPINB3P29508 390 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 BUD31P41223 144 aaPredicted RBP11.74□□□□□ -0.53
TRA2A-209ENST00000494255 EEF1A2Q05639 463 aaKnown RBP11.74□□□□□ -0.53
TRA2A-209ENST00000494255 TTMPQ5BVD1 217 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 DCAF10Q5QP82 559 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 SH2D4BQ5SQS7 431 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 TMEM205Q6UW68 189 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 SCIMPQ6UWF3 145 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 COMMD6Q7Z4G1 85 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 GPR180Q86V85 440 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 APLFQ8IW19 511 aaPredicted RBP11.74□□□□□ -0.53
TRA2A-209ENST00000494255 ZNF595Q8IYB9 648 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 OR11G2Q8NGC1 345 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 C8orf44Q96CB5 159 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 ZNF717Q9BY31 904 aaPredicted RBP11.74□□□□□ -0.53
TRA2A-209ENST00000494255 ACPTQ9BZG2 426 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 PRTFDC1Q9NRG1 225 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 KCMF1Q9P0J7 381 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 G3BP2Q9UN86 482 aaKnown RBP11.74□□□□□ -0.53
TRA2A-209ENST00000494255 TRAF6Q9Y4K3 522 aa11.74□□□□□ -0.53
TRA2A-209ENST00000494255 NSG1A0A0A6YYJ2 146 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 SLC28A1O00337 649 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 CYR61O00622 381 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 SASH3O75995 380 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 HPP00738 406 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 KLK1P06870 262 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 CHN1P15882 459 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 BGNP21810 368 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 MAPK12P53778 367 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 HNRNPH2P55795 449 aaKnown RBP11.73□□□□□ -0.53
TRA2A-209ENST00000494255 POLE2P56282 527 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 HSD17B7P56937 341 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 WDR4P57081 412 aaKnown RBP11.73□□□□□ -0.53
TRA2A-209ENST00000494255 ABCE1P61221 599 aaKnown RBP11.73□□□□□ -0.53
TRA2A-209ENST00000494255 HMGCS1Q01581 520 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 ACTN3Q08043 901 aaPredicted RBP11.73□□□□□ -0.53
TRA2A-209ENST00000494255 ACSM2AQ08AH3 577 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 CHAF1BQ13112 559 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 SLC13A2Q13183 592 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 STX3Q13277 289 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 SPIN4Q56A73 249 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 SPDYAQ5MJ70 313 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 CCNYL2Q5T2Q4 361 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 KANK2Q63ZY3 851 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 CPZQ66K79 652 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 ACSM2BQ68CK6 577 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 MRM1Q6IN84 353 aaKnown RBP11.73□□□□□ -0.53
TRA2A-209ENST00000494255 NDUFAF7Q7L592 441 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 CPEB2Q7Z5Q1 589 aaKnown RBP11.73□□□□□ -0.53
TRA2A-209ENST00000494255 ANKRD37Q7Z713 158 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 TRIM42Q8IWZ5 723 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 CLYBLQ8N0X4 340 aa11.73□□□□□ -0.53
TRA2A-209ENST00000494255 C1orf52Q8N6N3 182 aaKnown RBP11.73□□□□□ -0.53
TRA2A-209ENST00000494255 OR6Y1Q8NGX8 325 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms