RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 OSBPL10Q9BXB5 764 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 FAM192AQ9GZU8 254 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 TCEAL2Q9H3H9 227 aaPredicted RBP10.13□□□□□ -0.79
CLCN6-208ENST00000494028 RAD21L1Q9H4I0 556 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 KLHL31Q9H511 634 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 TMEM38AQ9H6F2 299 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 C5AR2Q9P296 337 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 APOBEC3BQ9UH17 382 aaKnown RBP10.13□□□□□ -0.79
CLCN6-208ENST00000494028 DUSP12Q9UNI6 340 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 FAF1Q9UNN5 650 aaPredicted RBP10.13□□□□□ -0.79
CLCN6-208ENST00000494028 DMTF1Q9Y222 760 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 KLHL20Q9Y2M5 609 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 SNX11Q9Y5W9 270 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 HS3ST3A1Q9Y663 406 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 DGKBQ9Y6T7 804 aa10.13□□□□□ -0.79
CLCN6-208ENST00000494028 CEP192Q8TEP8 1941 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 IGHV1OR15-9A0A0B4J2B8 117 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 H0YAE9 185 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 hCG_2039718K7EN88 272 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 MAN2B1O00754 1011 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 ERI3O43414 337 aaKnown RBP10.12□□□□□ -0.79
CLCN6-208ENST00000494028 NOBOXO60393 691 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 B4GALT2O60909 372 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 PRKRAO75569 313 aaKnown RBP10.12□□□□□ -0.79
CLCN6-208ENST00000494028 PGM3O95394 542 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 H6PDO95479 791 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 KRT75O95678 551 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 CLIC3O95833 236 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 ALBP02768 609 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 OPN1SWP03999 348 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 FABP3P05413 133 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 SERPIND1P05546 499 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 CELA2BP08218 269 aaPredicted RBP10.12□□□□□ -0.79
CLCN6-208ENST00000494028 UGT2B7P16662 529 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 CERS1P27544 350 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 AQP1P29972 269 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 CHI3L1P36222 383 aaPredicted RBP10.12□□□□□ -0.79
CLCN6-208ENST00000494028 CRATP43155 626 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 ARFIP1P53367 373 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 PLA2G16P53816 162 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 PCBP3P57721 371 aaKnown RBP10.12□□□□□ -0.79
CLCN6-208ENST00000494028 UBE2IP63279 158 aaKnown RBP10.12□□□□□ -0.79
CLCN6-208ENST00000494028 ILF3Q12906 894 aaKnown RBP eCLIP10.12□□□□□ -0.79
CLCN6-208ENST00000494028 SCARB2Q14108 478 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 SPIDRQ14159 915 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 GPR18Q14330 331 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 GAS6Q14393 721 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 KIR2DS3Q14952 304 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 SMAD2Q15796 467 aaKnown RBP10.12□□□□□ -0.79
CLCN6-208ENST00000494028 IQCCQ4KMZ1 466 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 OR4C11Q6IEV9 310 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 OR2T5Q6IEZ7 315 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 FAM180BQ6P0A1 224 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 TRIM40Q6P9F5 258 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 ABHD17CQ6PCB6 329 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 SHQ1Q6PI26 577 aaKnown RBP10.12□□□□□ -0.79
CLCN6-208ENST00000494028 CCDC80Q76M96 950 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 ZDHHC13Q8IUH4 622 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 TBC1D19Q8N5T2 526 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 NATD1Q8N6N6 113 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 METTL25Q8N6Q8 603 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 OR2L5Q8NG80 312 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 OR2T29Q8NH02 315 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 OR8K5Q8NH50 307 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 ZFP28Q8NHY6 868 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 NT5CQ8TCD5 201 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 GPBAR1Q8TDU6 330 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 PATE1Q8WXA2 126 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 TAMM41Q96BW9 452 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 NEURL3Q96EH8 262 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 SLC6A18Q96N87 628 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 MYCBPQ99417 103 aaPredicted RBP10.12□□□□□ -0.79
CLCN6-208ENST00000494028 EPB41L1Q9H4G0 881 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 SERHL2Q9H4I8 314 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 SMURF2Q9HAU4 748 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 TM9SF3Q9HD45 589 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 IL1RAPQ9NPH3 570 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 C1GALT1Q9NS00 363 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 POT1Q9NUX5 634 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 EVA1BQ9NVM1 165 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 WSB2Q9NYS7 404 aaPredicted RBP10.12□□□□□ -0.79
CLCN6-208ENST00000494028 EHD3Q9NZN3 535 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 CA14Q9ULX7 337 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 ANGPT4Q9Y264 503 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 SLCO1B1Q9Y6L6 691 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 EYSQ5T1H1 3165 aa10.12□□□□□ -0.79
CLCN6-208ENST00000494028 CACNA1IQ9P0X4 2223 aa10.11□□□□□ -0.79
CLCN6-208ENST00000494028 CCDC88CQ9P219 2028 aa10.11□□□□□ -0.79
CLCN6-208ENST00000494028 EME2A4GXA9 379 aaPredicted RBP10.11□□□□□ -0.79
CLCN6-208ENST00000494028 FAM221BA6H8Z2 402 aa10.11□□□□□ -0.79
CLCN6-208ENST00000494028 TRIM64A6NGJ6 449 aa10.11□□□□□ -0.79
CLCN6-208ENST00000494028 TRIM64CA6NLI5 447 aa10.11□□□□□ -0.79
CLCN6-208ENST00000494028 G3V2T6 193 aa10.11□□□□□ -0.79
CLCN6-208ENST00000494028 P2RX6O15547 441 aa10.11□□□□□ -0.79
CLCN6-208ENST00000494028 E2F6O75461 281 aa10.11□□□□□ -0.79
CLCN6-208ENST00000494028 AIFM1O95831 613 aa10.11□□□□□ -0.79
CLCN6-208ENST00000494028 TFAP2AP05549 437 aa10.11□□□□□ -0.79
CLCN6-208ENST00000494028 PABPC4LP0CB38 370 aaKnown RBP10.11□□□□□ -0.79
CLCN6-208ENST00000494028 FOSL2P15408 326 aa10.11□□□□□ -0.79
CLCN6-208ENST00000494028 FPR1P21462 350 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms