RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 ERI3O43414 337 aaKnown RBP13.35□□□□□ -0.27
PTPN7-216ENST00000492977 TNFRSF21O75509 655 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 UGT2B7P16662 529 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 HIST1H1TP22492 207 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-216ENST00000492977 ATP5A1P25705 553 aaKnown RBP13.35□□□□□ -0.27
PTPN7-216ENST00000492977 CD27P26842 260 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 CHI3L1P36222 383 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-216ENST00000492977 CRATP43155 626 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 MAGEA2P43356 314 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 MANFP55145 182 aaKnown RBP13.35□□□□□ -0.27
PTPN7-216ENST00000492977 PCBP4P57723 403 aaKnown RBP13.35□□□□□ -0.27
PTPN7-216ENST00000492977 RELAQ04206 551 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 MYBPC3Q14896 1274 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 PROX2Q3B8N5 592 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.35□□□□□ -0.27
PTPN7-216ENST00000492977 TOR1AIP1Q5JTV8 583 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 MRM1Q6IN84 353 aaKnown RBP13.35□□□□□ -0.27
PTPN7-216ENST00000492977 ZNF793Q6ZN11 406 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 CBLL1Q75N03 491 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 EIF3MQ7L2H7 374 aaKnown RBP13.35□□□□□ -0.27
PTPN7-216ENST00000492977 ADHFE1Q8IWW8 467 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 RBM12BQ8IXT5 1001 aaKnown RBP13.35□□□□□ -0.27
PTPN7-216ENST00000492977 CLEC4FQ8N1N0 589 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 SVOPLQ8N434 492 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 FAM160A2Q8N612 972 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-216ENST00000492977 CADM4Q8NFZ8 388 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 TFAP2CQ92754 450 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 TMBIM1Q969X1 311 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 THAP11Q96EK4 314 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 ZBED6CLQ96FA7 236 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-216ENST00000492977 CNBD2Q96M20 576 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 NLNQ9BYT8 704 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 TMEM38AQ9H6F2 299 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 NEUROD4Q9HD90 331 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 ACSS1Q9NUB1 689 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-216ENST00000492977 GPATCH2Q9NW75 528 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 UBAP1Q9NZ09 502 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 ACTR10Q9NZ32 417 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 KLHL20Q9Y2M5 609 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 KLK4Q9Y5K2 254 aa13.35□□□□□ -0.27
PTPN7-216ENST00000492977 OR6C74A6NCV1 312 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 DLGAP1O14490 977 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 EI24O14681 340 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 ZNF682O95780 498 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 RGS1Q08116 209 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 SLAMF1Q13291 335 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 C16orf72Q14CZ0 275 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 MLC1Q15049 377 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 SLC5A12Q1EHB4 618 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 LRRC23Q53EV4 343 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-216ENST00000492977 GCNT6Q5T4J0 391 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 NDUFAF5Q5TEU4 345 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 ANGPTL8Q6UXH0 198 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 CARM1Q86X55 608 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 ZDHHC13Q8IUH4 622 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 APLFQ8IW19 511 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-216ENST00000492977 CHERPQ8IWX8 916 aaKnown RBP13.34□□□□□ -0.27
PTPN7-216ENST00000492977 AMER3Q8N944 861 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 ACOT4Q8N9L9 421 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 NT5CQ8TCD5 201 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 SLC6A18Q96N87 628 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 ANKRD60Q9BZ19 345 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 FOXQ1Q9C009 403 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 EPS8L2Q9H6S3 715 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 IL1RAPQ9NPH3 570 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 PLSCR2Q9NRY7 297 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 C1GALT1Q9NS00 363 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 TEX10Q9NXF1 929 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-216ENST00000492977 ASB4Q9Y574 426 aa13.34□□□□□ -0.27
PTPN7-216ENST00000492977 A0A0G2JN53 185 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 GSAPA4D1B5 854 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 C2orf74A8MZ97 194 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 GNGT2O14610 69 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 PPM1DO15297 605 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 SMNDC1O75940 238 aaKnown RBP eCLIP13.33□□□□□ -0.28
PTPN7-216ENST00000492977 ETFAP13804 333 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 POLR2CP19387 275 aaPredicted RBP13.33□□□□□ -0.28
PTPN7-216ENST00000492977 SOAT1P35610 550 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 RPS9P46781 194 aaKnown RBP13.33□□□□□ -0.28
PTPN7-216ENST00000492977 PRIM2P49643 509 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 MERTKQ12866 999 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 BIRC2Q13490 618 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 ELOAQ14241 798 aaKnown RBP13.33□□□□□ -0.28
PTPN7-216ENST00000492977 ZNF542PQ5EBM4 170 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 COX20Q5RI15 118 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 FBXO42Q6P3S6 717 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 FIGLAQ6QHK4 219 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 ASPGQ86U10 573 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 IQCHQ86VS3 1027 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 RNF130Q86XS8 419 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 ZDHHC21Q8IVQ6 265 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 SLC30A8Q8IWU4 369 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 SPEM1Q8N4L4 309 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 PSMA8Q8TAA3 256 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 SLC37A2Q8TED4 501 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 TBC1D20Q96BZ9 403 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 SDCCAG3Q96C92 435 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 NEURL3Q96EH8 262 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 MACROD1Q9BQ69 325 aa13.33□□□□□ -0.28
PTPN7-216ENST00000492977 ASPSCR1Q9BZE9 553 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms