RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 F2RL3Q96RI0 385 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 CSF3RQ99062 836 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 EFCAB11Q9BUY7 163 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 ADAP2Q9NPF8 381 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 GRHL1Q9NZI5 618 aa17.14■□□□□ 0.33
SMIM4-205ENST00000491607 ZNF223Q9UK11 482 aaPredicted RBP17.14■□□□□ 0.33
SMIM4-205ENST00000491607 MYOCOSA0A1B0GUC4 107 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 KLRC4-KLRK1H3BQV0 150 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 PRRG2O14669 202 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 PEX1O43933 1283 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 COX6B1P14854 86 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 CD22P20273 847 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 PTGER1P34995 402 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 SPRP35270 261 aaPredicted RBP17.13■□□□□ 0.33
SMIM4-205ENST00000491607 GMPRP36959 345 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 KCNC1P48547 511 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 SSR4P51571 173 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 PLTPP55058 493 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 GPR85P60893 370 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 IRF8Q02556 426 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 CHIT1Q13231 466 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 LAPTM5Q13571 262 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 C3P1Q6ZMU1 363 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 NCCRP1Q6ZVX7 275 aaPredicted RBP17.13■□□□□ 0.33
SMIM4-205ENST00000491607 PPM1NQ8N819 430 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 POGLUT1Q8NBL1 392 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 SREK1Q8WXA9 508 aaKnown RBP17.13■□□□□ 0.33
SMIM4-205ENST00000491607 KIAA1191Q96A73 305 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 KCNC2Q96PR1 638 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 CD244Q9BZW8 370 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 ALG9Q9H6U8 611 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 PTBP2Q9UKA9 531 aaKnown RBP17.13■□□□□ 0.33
SMIM4-205ENST00000491607 DAPP1Q9UN19 280 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 ERVK-11Q9UQG0 969 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 UTP11Q9Y3A2 253 aaKnown RBP17.13■□□□□ 0.33
SMIM4-205ENST00000491607 CLDN16Q9Y5I7 305 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 CLCA3PQ9Y6N3 262 aa17.13■□□□□ 0.33
SMIM4-205ENST00000491607 MYO9AB2RTY4 2548 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 SUPT3HB4E1H0 165 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 CYR61O00622 381 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 PRKNO60260 465 aaPredicted RBP17.12■□□□□ 0.33
SMIM4-205ENST00000491607 CDC40O60508 579 aaKnown RBP eCLIP17.12■□□□□ 0.33
SMIM4-205ENST00000491607 SUPT3HO75486 399 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 FAM155BO75949 473 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 ZFAND5O76080 213 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 GSTA2P09210 222 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 AGAP20933 346 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 MSH2P43246 934 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 GPX6P59796 221 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 STX4Q12846 297 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 ELAVL1Q15717 326 aaKnown RBP17.12■□□□□ 0.33
SMIM4-205ENST00000491607 KBTBD12Q3ZCT8 623 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 GRTP1Q5TC63 336 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 C16orf47Q6ZP98 133 aaPredicted RBP17.12■□□□□ 0.33
SMIM4-205ENST00000491607 CYS1Q717R9 158 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 MDGA2Q7Z553 956 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 DOLPP1Q86YN1 238 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 TMEM132CQ8N3T6 1108 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 STAG3L4Q8TBR4 150 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 WDR34Q96EX3 536 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 UBXN10Q96LJ8 280 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 PHF12Q96QT6 1004 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 LIN28AQ9H9Z2 209 aaKnown RBP17.12■□□□□ 0.33
SMIM4-205ENST00000491607 TIMMDC1Q9NPL8 285 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 KCMF1Q9P0J7 381 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 PPIEQ9UNP9 301 aaKnown RBP17.12■□□□□ 0.33
SMIM4-205ENST00000491607 YARS2Q9Y2Z4 477 aaKnown RBP17.12■□□□□ 0.33
SMIM4-205ENST00000491607 ASB1Q9Y576 335 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 CSMD1Q96PZ7 3565 aa17.12■□□□□ 0.33
SMIM4-205ENST00000491607 HS6ST1O60243 411 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 CTNSO60931 367 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 SH3BGRLO75368 114 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 OR2J2O76002 312 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 CLDN14O95500 239 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 PCNAP12004 261 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 EPORP19235 508 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 TNNI3P19429 210 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 TFEBP19484 476 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 GPR143P51810 404 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 EFTUD2Q15029 972 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMIM4-205ENST00000491607 LRRC70Q7Z2Q7 622 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 CMC1Q7Z7K0 106 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 TBC1D1Q86TI0 1168 aaPredicted RBP17.11■□□□□ 0.33
SMIM4-205ENST00000491607 ALOXE3Q9BYJ1 711 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 ROGDIQ9GZN7 287 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 RAB17Q9H0T7 212 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 PRDM7Q9NQW5 492 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 NUDT4Q9NZJ9 180 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 SPACA6W5XKT8 324 aa17.11■□□□□ 0.33
SMIM4-205ENST00000491607 A0A1B0GTH9 108 aa17.1■□□□□ 0.33
SMIM4-205ENST00000491607 SYNDIG1LA6NDD5 238 aa17.1■□□□□ 0.33
SMIM4-205ENST00000491607 A8MVJ9 347 aa17.1■□□□□ 0.33
SMIM4-205ENST00000491607 RTCAO00442 366 aaKnown RBP17.1■□□□□ 0.33
SMIM4-205ENST00000491607 LDB3O75112 727 aa17.1■□□□□ 0.33
SMIM4-205ENST00000491607 C1QAP02745 245 aa17.1■□□□□ 0.33
SMIM4-205ENST00000491607 TUBB4AP04350 444 aa17.1■□□□□ 0.33
SMIM4-205ENST00000491607 SLC35E2BP0CK96 405 aa17.1■□□□□ 0.33
SMIM4-205ENST00000491607 CASQ1P31415 396 aa17.1■□□□□ 0.33
SMIM4-205ENST00000491607 STX2P32856 288 aa17.1■□□□□ 0.33
SMIM4-205ENST00000491607 PTGS2P35354 604 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms