RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 PHYHD1Q5SRE7 291 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 PRAMEF8Q5VWM4 474 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 TSSK4Q6SA08 328 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 NHLRC1Q6VVB1 395 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 TRMT11Q7Z4G4 463 aaKnown RBP4.55□□□□□ -1.68
RTN4-215ENST00000491592 ADAMTSL2Q86TH1 951 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 FJX1Q86VR8 437 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 CHSY1Q86X52 802 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 ECHDC2Q86YB7 292 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 NRROSQ86YC3 692 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 CAMK1DQ8IU85 385 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 CDKL3Q8IVW4 592 aaPredicted RBP4.55□□□□□ -1.68
RTN4-215ENST00000491592 FOXRED2Q8IWF2 684 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 LSMEM2Q8N112 164 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 C11orf65Q8NCR3 313 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 OR56B1Q8NGI3 324 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 SLC2A14Q8TDB8 520 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 LRRC15Q8TF66 581 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 U2AF1L4Q8WU68 220 aaKnown RBP4.55□□□□□ -1.68
RTN4-215ENST00000491592 LIPHQ8WWY8 451 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 CNOT9Q92600 299 aaKnown RBP4.55□□□□□ -1.68
RTN4-215ENST00000491592 AKAP1Q92667 903 aaKnown RBP eCLIP4.55□□□□□ -1.68
RTN4-215ENST00000491592 MCUR1Q96AQ8 359 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 DNAJC19Q96DA6 116 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 SNRNP40Q96DI7 357 aaKnown RBP4.55□□□□□ -1.68
RTN4-215ENST00000491592 SLC47A1Q96FL8 570 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 SLC41A3Q96GZ6 507 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 C12orf66Q96MD2 445 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 CRAMP1Q96RY5 1269 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 ASCL2Q99929 193 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 ZNF577Q9BSK1 485 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 FICDQ9BVA6 458 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 FRMD8P1Q9BZ68 369 aaPredicted RBP4.55□□□□□ -1.68
RTN4-215ENST00000491592 HDHD2Q9H0R4 259 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 S1PR5Q9H228 398 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 UBQLN3Q9H347 655 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 EPHX3Q9H6B9 360 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 PNPLA3Q9NST1 481 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 OR6C3Q9NZP0 311 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 NCKIPSDQ9NZQ3 722 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 HMGXB4Q9UGU5 601 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 UBQLN2Q9UHD9 624 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 HAO1Q9UJM8 370 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 PLA2G4CQ9UP65 541 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 MGAT4BQ9UQ53 548 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 ERVK-19Q9WJR5 959 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 COX11Q9Y6N1 276 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 A0A1B0GUL6 1792 aa4.55□□□□□ -1.68
RTN4-215ENST00000491592 NUP98P52948 1817 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 WNK3Q9BYP7 1800 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 CYP3A7-CYP3A51PA0A087WV96 503 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 A0A0A6YYC8 382 aaPredicted RBP4.54□□□□□ -1.68
RTN4-215ENST00000491592 A0A0J9YYE9 177 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 SMIM31A0A1B0GVY4 71 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 WDR91A4D1P6 747 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 SMCO2A6NFE2 343 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 C5orf52A6NGY3 159 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 SMIM23A6NLE4 172 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 OR52A4PA6NMU1 304 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 SUPT3HB4E1H0 165 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 E9PMD0 336 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 F8W810 466 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 I3L1I5 382 aaPredicted RBP4.54□□□□□ -1.68
RTN4-215ENST00000491592 CLIC1O00299 241 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 PDXKO00764 312 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 NKX2-8O15522 239 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 ST8SIA3O43173 380 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 STRNO43815 780 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 ATP9AO75110 1047 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 SLC25A12O75746 678 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 MYO1DO94832 1006 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 TMCC1O94876 653 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 CDK14O94921 469 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 TGM6O95932 706 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 TRBC1P01850 177 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 CXCL10P02778 98 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 UGT2B4P06133 528 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 GLAP06280 429 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 CPA3P15088 417 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 GJA1P17302 382 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 CEBPBP17676 345 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 PTNP21246 168 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 MSR1P21757 451 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 DRD5P21918 477 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 CYP3A7P24462 503 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 EEF1B2P24534 225 aaKnown RBP4.54□□□□□ -1.68
RTN4-215ENST00000491592 CCND3P30281 292 aaPredicted RBP4.54□□□□□ -1.68
RTN4-215ENST00000491592 SERPINB6P35237 376 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 SLCO1A2P46721 670 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 LEPRP48357 1165 aaKnown RBP4.54□□□□□ -1.68
RTN4-215ENST00000491592 PSMD7P51665 324 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 NAPAP54920 295 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 TAS2R50P59544 299 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 SELENOVP59797 346 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 YWHAGP61981 247 aaKnown RBP eCLIP4.54□□□□□ -1.68
RTN4-215ENST00000491592 IRX4P78413 519 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 XIAPP98170 497 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 TGM3Q08188 693 aa4.54□□□□□ -1.68
RTN4-215ENST00000491592 SLC10A2Q12908 348 aaPredicted RBP4.54□□□□□ -1.68
RTN4-215ENST00000491592 BCL2A1Q16548 175 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms