RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 B3GNT7Q8NFL0 401 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 DNAJB8Q8NHS0 232 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 PTPMT1Q8WUK0 201 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-211ENST00000491581 GAL3ST3Q96A11 431 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 LRRC39Q96DD0 335 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 ERP44Q9BS26 406 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 DEFB126Q9BYW3 111 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 DERL2Q9GZP9 239 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 REXO4Q9GZR2 422 aaKnown RBP8.29□□□□□ -1.08
HDAC3-211ENST00000491581 OR51B5Q9H339 312 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 SEMA4BQ9NPR2 832 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-211ENST00000491581 DNAJC11Q9NVH1 559 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 PTBP2Q9UKA9 531 aaKnown RBP8.29□□□□□ -1.08
HDAC3-211ENST00000491581 ENTPD4Q9Y227 616 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 MEMO1Q9Y316 297 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 POLEQ07864 2286 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 ITPR2Q14571 2701 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 GLOD5A6NK44 160 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 SUPT3HB4E1H0 165 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 HNRNPRO43390 633 aaKnown RBP8.28□□□□□ -1.08
HDAC3-211ENST00000491581 PEX1O43933 1283 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 FGF17O60258 216 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 SUPT3HO75486 399 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 SIX3O95343 332 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-211ENST00000491581 GBAP04062 536 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 IFNA16P05015 189 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 MTHFD2P13995 350 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 ABOP16442 354 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 STMN1P16949 149 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 ZNF24P17028 368 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 SOX3P41225 446 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 CYB561P49447 251 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 HLCSP50747 726 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 SLC12A2P55011 1212 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 RAB38P57729 211 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 TAS2R50P59544 299 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 RAB10P61026 200 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 POU4F1Q01851 419 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 SNTB1Q13884 538 aaKnown RBP8.28□□□□□ -1.08
HDAC3-211ENST00000491581 PDK4Q16654 411 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 ADPRMQ3LIE5 342 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 CMPK2Q5EBM0 449 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 C18orf63Q68DL7 685 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 CEP128Q6ZU80 1094 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 ISCA2Q86U28 154 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 CD163Q86VB7 1156 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 CENPLQ8N0S6 344 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-211ENST00000491581 CYP4Z2PQ8N1L4 340 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 PLD6Q8N2A8 252 aaKnown RBP8.28□□□□□ -1.08
HDAC3-211ENST00000491581 PDPRQ8NCN5 879 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 OR2L5Q8NG80 312 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 ANKRD9Q96BM1 317 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-211ENST00000491581 MAGED4Q96JG8 741 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 FAR2Q96K12 515 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 UBXN10Q96LJ8 280 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 CDK15Q96Q40 435 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 ATOH8Q96SQ7 321 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 MS4A8Q9BY19 250 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 TRIM8Q9BZR9 551 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 UCK2Q9BZX2 261 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 OR8D2Q9GZM6 311 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 RNF112Q9ULX5 631 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 DAPP1Q9UN19 280 aa8.28□□□□□ -1.08
HDAC3-211ENST00000491581 RP1L1Q8IWN7 2480 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 A0A1B0GTL3 188 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 NKX2-6A6NCS4 301 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 ANKDD1BA6NHY2 528 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 KDM4EB2RXH2 506 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 B3GALT2O43825 422 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 H2AFYO75367 372 aaKnown RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 EEDO75530 441 aaKnown RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 CLEC3AO75596 197 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 STK16O75716 305 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 TPOP07202 933 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 ESRRAP11474 423 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 ATP5A1P25705 553 aaKnown RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 GGT5P36269 586 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 GP5P40197 560 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 MAGEA4P43358 317 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 DNASE1L1P49184 302 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 HNMTP50135 292 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 NEK2P51955 445 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 HK2P52789 917 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 HNRNPH2P55795 449 aaKnown RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 WNT3P56703 355 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 STXBP1P61764 594 aaKnown RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 IRF8Q02556 426 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 UAP1Q16222 522 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 ZNF630Q2M218 657 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 EMC4Q5J8M3 183 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 MROH9Q5TGP6 573 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 TMEM64Q6YI46 380 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 BNC2Q6ZN30 1099 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 Q6ZPB1 254 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 RAPH1Q70E73 1250 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 CCDC71Q8IV32 467 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 TBC1D19Q8N5T2 526 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 TMEM156Q8N614 296 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 ACOT4Q8N9L9 421 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms