RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 THAP3Q8WTV1 239 aaPredicted RBP15.5■□□□□ 0.07
PDLIM2-217ENST00000491330 IFT81Q8WYA0 676 aa15.5■□□□□ 0.07
PDLIM2-217ENST00000491330 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.5■□□□□ 0.07
PDLIM2-217ENST00000491330 ATP6V1E2Q96A05 226 aa15.5■□□□□ 0.07
PDLIM2-217ENST00000491330 CDC42EP4Q9H3Q1 356 aaKnown RBP15.5■□□□□ 0.07
PDLIM2-217ENST00000491330 ACTR8Q9H981 624 aa15.5■□□□□ 0.07
PDLIM2-217ENST00000491330 NINJ2Q9NZG7 142 aa15.5■□□□□ 0.07
PDLIM2-217ENST00000491330 COPS7AQ9UBW8 275 aa15.5■□□□□ 0.07
PDLIM2-217ENST00000491330 TMCO1Q9UM00 188 aa15.5■□□□□ 0.07
PDLIM2-217ENST00000491330 DAPP1Q9UN19 280 aa15.5■□□□□ 0.07
PDLIM2-217ENST00000491330 ERVK-11Q9UQG0 969 aa15.5■□□□□ 0.07
PDLIM2-217ENST00000491330 A0A087WUV0 522 aaPredicted RBP15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 IGKV3D-11A0A0A0MRZ8 115 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 TRBV11-1A0A0K0K1C0 115 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 CCL21O00585 134 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 KRT38O76015 456 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 ABHD2P08910 425 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 RBP1P09455 135 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 SLC35E2BP0CK96 405 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 ZNF24P17028 368 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 EFNA3P52797 238 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 MLF1P58340 268 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 RUNX2Q13950 521 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 C1QL3Q5VWW1 255 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 LIPJQ5W064 366 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 RPTNQ6XPR3 784 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 TRMT10CQ7L0Y3 403 aaKnown RBP15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 GALNTL5Q7Z4T8 443 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 GPALPP1Q8IXQ4 340 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 GHDCQ8N2G8 530 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 TEX9Q8N6V9 391 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 FAM47BQ8NA70 645 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 MDS2Q8NDY4 140 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 OR14A16Q8NHC5 309 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 SLC44A1Q8WWI5 657 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 ESAMQ96AP7 390 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 RGMAQ96B86 450 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 F2RL3Q96RI0 385 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 VPS11Q9H270 941 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 WDR41Q9HAD4 459 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 TIMMDC1Q9NPL8 285 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 NECTIN3Q9NQS3 549 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 YARS2Q9Y2Z4 477 aaKnown RBP15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 BSNQ9UPA5 3926 aa15.49■□□□□ 0.07
PDLIM2-217ENST00000491330 A0A096LPK6 155 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 FAM155BO75949 473 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 C2P06681 752 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 ABOP16442 354 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 CPN2P22792 545 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 PTX3P26022 381 aaPredicted RBP15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 TPP2P29144 1249 aaPredicted RBP15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 TRHRP34981 398 aaPredicted RBP15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 SSR4P51571 173 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 ARFIP1P53367 373 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 ALDH18A1P54886 795 aaKnown RBP15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 LIM2P55344 173 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 PCDH1Q08174 1060 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 ZRSR2Q15696 482 aaKnown RBP15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 PFKFB4Q16877 469 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 FBXO48Q5FWF7 155 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 PAOXQ6QHF9 649 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 HSDL2Q6YN16 418 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 SCUBE1Q8IWY4 988 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 MORN4Q8NDC4 146 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 UBTD2Q8WUN7 234 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 ISL2Q96A47 359 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 NXNL1Q96CM4 212 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 SCMH1Q96GD3 660 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 RBM18Q96H35 190 aaKnown RBP15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 ART5Q96L15 291 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 SIGLEC12Q96PQ1 595 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 ALOXE3Q9BYJ1 711 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 SNX15Q9NRS6 342 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 FETUBQ9UGM5 382 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 PHF11Q9UIL8 331 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 ZNF490Q9ULM2 529 aaPredicted RBP15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 PTPN13Q12923 2485 aa15.48■□□□□ 0.07
PDLIM2-217ENST00000491330 NPIPA5E9PKD4 350 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 UBXN8O00124 270 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 UGDHO60701 494 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 SLC19A2O60779 497 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 DNAJB6O75190 326 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 SMIM24O75264 130 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 KLHL2O95198 593 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 TGFB1P01137 390 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 COL6A2P12110 1019 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 CERS1P27544 350 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 ECHS1P30084 290 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 BUD31P41223 144 aaPredicted RBP15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 PIK3CBP42338 1070 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 TDGF1P3P51864 188 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 DDX39BQ13838 428 aaKnown RBP15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 TSNAXIP1Q2TAA8 658 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 KHDRBS2Q5VWX1 349 aaKnown RBP15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 GRHL2Q6ISB3 625 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 LCA5Q86VQ0 697 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 LAS2Q8IYD9 372 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 CYP4Z2PQ8N1L4 340 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms