RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	ZNF655	Q8N720	491 aa	Predicted RBP	6.06	□□□□□ -1.44
FN1-223	ENST00000490833	AVL9	Q8NBF6	648 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	OR9Q1	Q8NGQ5	310 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	CLHC1	Q8NHS4	586 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	SPPL2A	Q8TCT8	520 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	SFXN5	Q8TD22	340 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	CYB5D2	Q8WUJ1	264 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	GAB3	Q8WWW8	586 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	MUL1	Q969V5	352 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	VOPP1	Q96AW1	172 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ELSPBP1	Q96BH3	223 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	TCEAL4	Q96EI5	215 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	MSANTD3	Q96H12	275 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	FBXL20	Q96IG2	436 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	TPD52L3	Q96J77	140 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	C7orf34	Q96L11	122 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	COG8	Q96MW5	612 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	COL21A1	Q96P44	957 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	KCNC2	Q96PR1	638 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	OR4K3	Q96R72	315 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ZNF300	Q96RE9	604 aa	Predicted RBP	6.06	□□□□□ -1.44
FN1-223	ENST00000490833	FAM129B	Q96TA1	746 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	INPP5K	Q9BT40	448 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	CCDC90B	Q9GZT6	254 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	RSPH9	Q9H1X1	276 aa	Predicted RBP	6.06	□□□□□ -1.44
FN1-223	ENST00000490833	MMP27	Q9H306	513 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ANKRD19P	Q9H560	264 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ARMC7	Q9H6L4	198 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	WDR26	Q9H7D7	661 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	DDX31	Q9H8H2	851 aa	Known RBP	6.06	□□□□□ -1.44
FN1-223	ENST00000490833	FANCE	Q9HB96	536 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	C3orf14	Q9HBI5	128 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	PREB	Q9HCU5	417 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	C1GALT1	Q9NS00	363 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	HCFC1R1	Q9NWW0	138 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	CLN6	Q9NWW5	311 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	LYAR	Q9NX58	379 aa	Known RBP	6.06	□□□□□ -1.44
FN1-223	ENST00000490833	KLHL28	Q9NXS3	571 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	OR6C2	Q9NZP2	312 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ANKMY1	Q9P2S6	941 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	P2RX2	Q9UBL9	471 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ENPP5	Q9UJA9	477 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	SLC13A4	Q9UKG4	626 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	FBXL21	Q9UKT6	434 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ITM2B	Q9Y287	266 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	6.06	□□□□□ -1.44
FN1-223	ENST00000490833	KLK4	Q9Y5K2	254 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	HCFC2	Q9Y5Z7	792 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	ENPP4	Q9Y6X5	453 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	SCN8A	Q9UQD0	1980 aa		6.06	□□□□□ -1.44
FN1-223	ENST00000490833	SCN5A	Q14524	2016 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833		A0A0G2JPF8	293 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	IGLON5	A6NGN9	336 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	CLCA1	A8K7I4	914 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	HEPACAM2	A8MVW5	462 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	HNRNPCL2	B2RXH8	293 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	HNRNPCL3	B7ZW38	293 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	PTGES3L	E9PB15	166 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	TAF4	O00268	1085 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	FAAH	O00519	579 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	TNFRSF10C	O14798	259 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	FAM20B	O75063	409 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	GABARAP	O95166	117 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	KAT7	O95251	611 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	GADD45G	O95257	159 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	EIF2S1	P05198	315 aa	Known RBP	6.05	□□□□□ -1.44
FN1-223	ENST00000490833	GSN	P06396	782 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	KLK1	P06870	262 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	EPHX1	P07099	455 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	HNRNPCL4	P0DMR1	293 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	PIP	P12273	146 aa	Predicted RBP	6.05	□□□□□ -1.44
FN1-223	ENST00000490833	ZNF8	P17098	575 aa	Predicted RBP	6.05	□□□□□ -1.44
FN1-223	ENST00000490833	CD40LG	P29965	261 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	CMPK1	P30085	196 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	TLX1	P31314	330 aa	Predicted RBP	6.05	□□□□□ -1.44
FN1-223	ENST00000490833	S100A5	P33763	92 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	SHMT2	P34897	504 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	SOX6	P35712	828 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	GGT2	P36268	569 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	FRK	P42685	505 aa	Predicted RBP	6.05	□□□□□ -1.44
FN1-223	ENST00000490833	PREP	P48147	710 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	DAP	P51397	102 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	PLA2G16	P53816	162 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	CRISP3	P54108	245 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	HBA1	P69905	142 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	RPP38	P78345	283 aa	Known RBP	6.05	□□□□□ -1.44
FN1-223	ENST00000490833	RAE1	P78406	368 aa	Known RBP	6.05	□□□□□ -1.44
FN1-223	ENST00000490833	KCNJ10	P78508	379 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	CDK3	Q00526	305 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	PLIN5	Q00G26	463 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	ALDH6A1	Q02252	535 aa	Known RBP	6.05	□□□□□ -1.44
FN1-223	ENST00000490833	BIK	Q13323	160 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	C1D	Q13901	141 aa	Known RBP	6.05	□□□□□ -1.44
FN1-223	ENST00000490833	MAD2L1BP	Q15013	274 aa	Predicted RBP	6.05	□□□□□ -1.44
FN1-223	ENST00000490833	NCF4	Q15080	339 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	TBCE	Q15813	527 aa	Predicted RBP	6.05	□□□□□ -1.44
FN1-223	ENST00000490833	NEDD8	Q15843	81 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	DUSP6	Q16828	381 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	RGS21	Q2M5E4	152 aa		6.05	□□□□□ -1.44
FN1-223	ENST00000490833	ITPRIPL2	Q3MIP1	535 aa		6.05	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms