RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 RAF1P04049 648 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 SERPINA6P08185 405 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 F7P08709 466 aaPredicted RBP7.59□□□□□ -1.19
USP39-216ENST00000490193 GABRA1P14867 456 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 PTMSP20962 102 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 CNR1P21554 472 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 HOXC12P31275 282 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 SOX3P41225 446 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 MAGEA5P43359 124 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 DGKQP52824 942 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 AP1S2P56377 157 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 SARNPP82979 210 aaKnown RBP7.59□□□□□ -1.19
USP39-216ENST00000490193 REEP5Q00765 189 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 FOXO1Q12778 655 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 THOC5Q13769 683 aaKnown RBP7.59□□□□□ -1.19
USP39-216ENST00000490193 ELAVL1Q15717 326 aaKnown RBP7.59□□□□□ -1.19
USP39-216ENST00000490193 PHKG1Q16816 387 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 DEFB113Q30KQ7 82 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 XKR6Q5GH73 641 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 CATSPEREQ5SY80 951 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 WLSQ5T9L3 541 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 UGT3A1Q6NUS8 523 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 IL20RBQ6UXL0 311 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 CAND1Q86VP6 1230 aaKnown RBP7.59□□□□□ -1.19
USP39-216ENST00000490193 PALM2Q8IXS6 379 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 RNF10Q8N5U6 811 aaKnown RBP7.59□□□□□ -1.19
USP39-216ENST00000490193 GPATCH11Q8N954 259 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 ANKRD53Q8N9V6 530 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 RNF214Q8ND24 703 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 OR8K3Q8NH51 312 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 GOT1L1Q8NHS2 421 aaPredicted RBP7.59□□□□□ -1.19
USP39-216ENST00000490193 CALML6Q8TD86 181 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 ASB15Q8WXK1 588 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 NEIL2Q969S2 332 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 NCLNQ969V3 563 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 ZNF669Q96BR6 464 aaPredicted RBP7.59□□□□□ -1.19
USP39-216ENST00000490193 SARAFQ96BY9 339 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 PYCR2Q96C36 320 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 FBXL8Q96CD0 374 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 ARSGQ96EG1 525 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 SGCZQ96LD1 299 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 RASL10BQ96S79 203 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 SH3GL2Q99962 352 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 NPLQ9BXD5 320 aaPredicted RBP7.59□□□□□ -1.19
USP39-216ENST00000490193 AICDAQ9GZX7 198 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 PELI2Q9HAT8 420 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 ADAP2Q9NPF8 381 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 DMRT3Q9NQL9 472 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 SAMD15Q9P1V8 674 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 TRMT6Q9UJA5 497 aaKnown RBP7.59□□□□□ -1.19
USP39-216ENST00000490193 FBXO5Q9UKT4 447 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 CBLCQ9ULV8 474 aa7.59□□□□□ -1.19
USP39-216ENST00000490193 CTAGE15A4D2H0 777 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 HSPB2A8KAH6 182 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 HAUS5O94927 633 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 ATE1O95260 518 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 SERPIND1P05546 499 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 HIST1H2AGP0C0S8 130 aaPredicted RBP7.58□□□□□ -1.2
USP39-216ENST00000490193 HIST1H2ADP20671 130 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 ENDOUP21128 410 aaKnown RBP7.58□□□□□ -1.2
USP39-216ENST00000490193 PPP2R1BP30154 601 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 MAGEA3P43357 314 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 MAN2A2P49641 1150 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 ASCL1P50553 236 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 HK2P52789 917 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 RAB8AP61006 207 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 CSHL1Q14406 222 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 HSPB2Q16082 182 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 SKOR2Q2VWA4 1001 aaPredicted RBP7.58□□□□□ -1.2
USP39-216ENST00000490193 HECTD2Q5U5R9 776 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 CASC4Q6P4E1 433 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 HSDL2Q6YN16 418 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 C16orf47Q6ZP98 133 aaPredicted RBP7.58□□□□□ -1.2
USP39-216ENST00000490193 RTL4Q6ZR62 310 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 GSTA5Q7RTV2 222 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 WDR53Q7Z5U6 358 aaPredicted RBP7.58□□□□□ -1.2
USP39-216ENST00000490193 CTAGE6Q86UF2 777 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 KRTAP1-3Q8IUG1 177 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 TMEM139Q8IV31 216 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 MYO1HQ8N1T3 1032 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 TMEM132CQ8N3T6 1108 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 RELL2Q8NC24 303 aaPredicted RBP7.58□□□□□ -1.2
USP39-216ENST00000490193 WFDC11Q8NEX6 87 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 MAIP1Q8WWC4 291 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 SLC5A11Q8WWX8 675 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 ATL1Q8WXF7 558 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 RNASE6Q93091 150 aaKnown RBP7.58□□□□□ -1.2
USP39-216ENST00000490193 GAL3ST3Q96A11 431 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 ALKBH8Q96BT7 664 aaKnown RBP7.58□□□□□ -1.2
USP39-216ENST00000490193 SCYL1Q96KG9 808 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 HIST1H2AHQ96KK5 128 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 HIST1H2AJQ99878 128 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 H2AFJQ9BTM1 129 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 KLHL31Q9H511 634 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 PRTFDC1Q9NRG1 225 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 PNO1Q9NRX1 252 aaKnown RBP7.58□□□□□ -1.2
USP39-216ENST00000490193 ARL15Q9NXU5 204 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 TAS2R13Q9NYV9 303 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 FOXD3Q9UJU5 478 aaPredicted RBP7.58□□□□□ -1.2
USP39-216ENST00000490193 ACAD8Q9UKU7 415 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms