RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 SERINC2Q96SA4 455 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 MAPKAP1Q9BPZ7 522 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 MRPL1Q9BYD6 325 aaKnown RBP7.4□□□□□ -1.23
SSR1-210ENST00000489567 ELOVL6Q9H5J4 265 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 MLXIPLQ9NP71 852 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 SSU72Q9NP77 194 aaKnown RBP7.4□□□□□ -1.23
SSR1-210ENST00000489567 CHCHD3Q9NX63 227 aaKnown RBP7.4□□□□□ -1.23
SSR1-210ENST00000489567 KCMF1Q9P0J7 381 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 ADGRE2Q9UHX3 823 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 DAPP1Q9UN19 280 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 CLDN16Q9Y5I7 305 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 BSNQ9UPA5 3926 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 SMG1Q96Q15 3661 aaKnown RBP7.39□□□□□ -1.23
SSR1-210ENST00000489567 WDR91A4D1P6 747 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 TGFBR3LH3BV60 316 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 CYR61O00622 381 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 B3GALT2O43825 422 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 TMPRSS11DO60235 418 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 BPGMP07738 259 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 DHRS4L1P0CG22 281 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 COX6A1P12074 109 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 RNH1P13489 461 aaKnown RBP7.39□□□□□ -1.23
SSR1-210ENST00000489567 MAOAP21397 527 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 HSD3B2P26439 372 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 SERPINB3P29508 390 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 SSR2P43308 183 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 PKNOX1P55347 436 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 MAGOHP61326 146 aaKnown RBP7.39□□□□□ -1.23
SSR1-210ENST00000489567 SKP1P63208 163 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 EEF1A2Q05639 463 aaKnown RBP7.39□□□□□ -1.23
SSR1-210ENST00000489567 Q0VFX4 171 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 IFT88Q13099 833 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 CUL3Q13618 768 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 ABRAXAS2Q15018 415 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 SOWAHCQ53LP3 525 aaPredicted RBP7.39□□□□□ -1.23
SSR1-210ENST00000489567 CFAP157Q5JU67 520 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 DCAF10Q5QP82 559 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 CLEC6AQ6EIG7 209 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 OR4C11Q6IEV9 310 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 NIPAL1Q6NVV3 410 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 TMEM205Q6UW68 189 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 CROCCP2Q86T23 111 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 APLFQ8IW19 511 aaPredicted RBP7.39□□□□□ -1.23
SSR1-210ENST00000489567 OR6Y1Q8NGX8 325 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 PRR7Q8TB68 274 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 METTL6Q8TCB7 284 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 RGMAQ96B86 450 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 UBL7Q96S82 380 aaPredicted RBP7.39□□□□□ -1.23
SSR1-210ENST00000489567 TBCDQ9BTW9 1192 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 NPLQ9BXD5 320 aaPredicted RBP7.39□□□□□ -1.23
SSR1-210ENST00000489567 RASSF4Q9H2L5 321 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 COPS7BQ9H9Q2 264 aaPredicted RBP7.39□□□□□ -1.23
SSR1-210ENST00000489567 KCNK9Q9NPC2 374 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 PSD3Q9NYI0 1048 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 MID2Q9UJV3 735 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 PPT2Q9UMR5 302 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 SNX6Q9UNH7 406 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 ACTL7BQ9Y614 415 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 CACNA1GO43497 2377 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 MED13Q9UHV7 2174 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 SCN2AQ99250 2005 aa7.39□□□□□ -1.23
SSR1-210ENST00000489567 LOC102723996A0A087X1L8 192 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 IGKV3D-11A0A0A0MRZ8 115 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 IGHV1-45A0A0A0MS14 117 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 A0A0A6YYD5 115 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 MYOCOSA0A1B0GUC4 107 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 A0A1W2PQ72 361 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 A6NL46 340 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 WASHC1A8K0Z3 465 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 TMEM233B4DJY2 109 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 PEX12O00623 359 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 ATXN7O15265 892 aaPredicted RBP7.38□□□□□ -1.23
SSR1-210ENST00000489567 PRKRAO75569 313 aaKnown RBP7.38□□□□□ -1.23
SSR1-210ENST00000489567 SASH3O75995 380 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 PDGFAP04085 211 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 CELA2AP08217 269 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 C8orf89P0DMQ9 161 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 ACPPP15309 386 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 NR1D1P20393 614 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 HMOX2P30519 316 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 HPDP32754 393 aaPredicted RBP7.38□□□□□ -1.23
SSR1-210ENST00000489567 CCL11P51671 97 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 RAP1GDS1P52306 607 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 HNRNPH2P55795 449 aaKnown RBP7.38□□□□□ -1.23
SSR1-210ENST00000489567 RAB38P57729 211 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 PHEXP78562 749 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 CBX1P83916 185 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 HMGCS1Q01581 520 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 TGM3Q08188 693 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 GALNT1Q10472 559 aaPredicted RBP7.38□□□□□ -1.23
SSR1-210ENST00000489567 TBL3Q12788 808 aaKnown RBP7.38□□□□□ -1.23
SSR1-210ENST00000489567 SLAMF1Q13291 335 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 RAPSNQ13702 412 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 PCOLCEQ15113 449 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 ZSCAN26Q16670 478 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 TUSC1Q2TAM9 212 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 AP5B1Q2VPB7 878 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 TUBB8Q3ZCM7 444 aa7.38□□□□□ -1.23
SSR1-210ENST00000489567 ARL13AQ5H913 290 aaPredicted RBP7.38□□□□□ -1.23
SSR1-210ENST00000489567 MRM1Q6IN84 353 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms