RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 SRSF4Q08170 494 aaKnown RBP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 FAPQ12884 760 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 FOXF2Q12947 444 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 DPYSL3Q14195 570 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 FAM214AQ32MH5 1076 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 SLC25A52Q3SY17 297 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 PPP6R3Q5H9R7 873 aaPredicted RBP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 METRNLQ641Q3 311 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 LANCL3Q6ZV70 420 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 ZNF550Q7Z398 422 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 RELL1Q8IUW5 271 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 CDKL3Q8IVW4 592 aaPredicted RBP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 RIBC1Q8N443 379 aaPredicted RBP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 TTC29Q8NA56 475 aaPredicted RBP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 OR2M7Q8NG81 312 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 LILRB1Q8NHL6 650 aaPredicted RBP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 FLVCR1-AS1Q8TAF5 88 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 SMAP2Q8WU79 429 aaPredicted RBP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 GLYATL1Q969I3 302 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 FBXW5Q969U6 566 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 NTAN1Q96AB6 310 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 ZNF285Q96NJ3 590 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 RNF157Q96PX1 679 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 OR2A14Q96R47 310 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 RBM4BQ9BQ04 359 aaKnown RBP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 SNRNP25Q9BV90 132 aaKnown RBP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 SFXN3Q9BWM7 321 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 FAM107BQ9H098 131 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 WWP1Q9H0M0 922 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 DHX35Q9H5Z1 703 aaKnown RBP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 LDAHQ9H6V9 325 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 ZFAND3Q9H8U3 227 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 SAYSD1Q9NPB0 183 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 PAK5Q9P286 719 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 TRGV5A0A0B4J1U4 118 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 A0A0G2JMM0 328 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 A0A0J9YY10 115 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 A0A0J9YYE9 177 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 A0A1W2PPB8 328 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 A0A1W2PRS3 328 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 CD8B2A6NJW9 211 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 CCT8L1PA6NM43 557 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 KIR3DP1A8MWS1 328 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 H3BRJ5 948 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 MT-CYBP00156 380 aaPredicted RBP6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 TRBC1P01850 177 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 NFKB1P19838 968 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 MDH1P40925 334 aaKnown RBP6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 MAGEA4P43358 317 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 ZNF135P52742 658 aaPredicted RBP6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 AIF1P55008 147 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 BASP1P80723 227 aaKnown RBP6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 GGTLC2Q14390 218 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 NOMO1Q15155 1222 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 KLHL22Q53GT1 634 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 ANKRD20A8PQ5CZ79 823 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 TCTE1Q5JU00 501 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 MICALCLQ6ZW33 695 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 AMIGO1Q86WK6 493 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 CILP2Q8IUL8 1156 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 GALNT12Q8IXK2 581 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 PDIK1LQ8N165 341 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 CYP4Z2PQ8N1L4 340 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 UMODL1-AS1Q8N2C9 162 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 UHMK1Q8TAS1 419 aaKnown RBP6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 ANKRD9Q96BM1 317 aaPredicted RBP6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 TLCD1Q96CP7 247 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 C11orf24Q96F05 449 aaPredicted RBP6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 PSKH2Q96QS6 385 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 PEBP4Q96S96 227 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 SELENOSQ9BQE4 189 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 TRAF4Q9BUZ4 470 aaPredicted RBP6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 RBCK1Q9BYM8 510 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 MAGEB5Q9BZ81 275 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 GRIP2Q9C0E4 1043 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 TFB2MQ9H5Q4 396 aaKnown RBP6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 VPS37BQ9H9H4 285 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 PCDH18Q9HCL0 1135 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 ACSS1Q9NUB1 689 aaPredicted RBP6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 TRPC4Q9UBN4 977 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 AP4E1Q9UPM8 1137 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 HEY1Q9Y5J3 304 aa6.84□□□□□ -1.31
EXOSC3-206ENST00000489414 EXPH5Q8NEV8 1989 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 EXOC1LA0A1B0GW35 172 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 ATP6AP2A0A1C7CYW4 349 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 RGSL1A5PLK6 1076 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 FRG2CA6NGY1 282 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 ARHGEF33A8MVX0 844 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 HACD1B0YJ81 288 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 VWC2LB2RUY7 222 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 E7EVH7 732 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 EBAG9O00559 213 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 NDUFAB1O14561 156 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 TIMM23O14925 209 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 CDH16O75309 829 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 ATP6AP2O75787 350 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 POP7O75817 140 aaKnown RBP6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 CD8AP01732 235 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms